Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4895g00019 ATGGATTTCGCTCTCAGGAAATCTTTCAAGTCCTATGGTTCCTACAAGCGTTCCCCGAGGCTTTCCGCAGGGGACAGCGCTGACGCTGGCCGCGAAGAAATTCCCATTCTATTCCAACAAGATTCATCTCCCGAACATAATCTTCTTAATCAGGCCCACGCTACTTCTTCCTCCGCCATGACCTCCACCGACAGCCCCACCTACAGCGGAGAGGTGATTGTCAAGATCGACGACAGCGACCCCAAATCCTCCAAAGCGGCCTTCTCCCAGGGTGAAAGCAAGATTCGCCGGGATCCCAGCTGCGACCTGTGGAAAGAAGGTGACGTTATCGCCACCAGACATGAACAGAGTTTCGATTTCCAGCAACCTGGCCCGAAAGCCGACGACCCTCCCTCCAAGCTCATTGGTAAATTCTTGCACAGACAGCAGCTCTCCGGGGACATGTCCCTCGATATGGATTTAGAGATGGACGAGCTCCAACATGATCCTTACAAGACGTATTTGCCTCCGCTGGACGAGACTGCGTCGCTGAGTTTCTCCAGGGAGCTCAAAGTCTCCTTCGAAGAACCGCCTCCTAATTCGGCGGACGAACCAGGCGACTCCTTTCGACGAAGGTACAATAATACGCCGGTCATGGATGAATTTCCGAAACCACCGCAGCCCGACCGTCGAGGCTCAGCACAGAATATTAATGCGGCAAACGGAGACGGCGAGGTTGTGAGGTGCACCTCAAACGCGTCTTTCGAGAGGAACCTTTCGTTGCAGAGGAAGTCGGGTTTGCTCCGGGCAAAAACCAAATCACGACTGATTGACCCGCCAGATGAACCCGAACGAAAATCGGGCCGGGTTCAGAAATCGGGGCAGATGCTGTCGGGCTTGCAGGCGGGGAATAATAAGAAAGGGGAGGAGGAGGAGGAGGACCCGTTTTTAGAAGAGGATCTTCCGGACGATTTCAAGAAGACCAAATTCAGCATTTGGGTTCTATTAGAATGGTTGAGTTTGATTTCAATTGTAGCGGCACTGATAACCACTCTCTGCATCCCATTCTTGAGAGGAAAGAATCTGTGGAAGCTGAAGTTATGGAAATGGGAGGTGATGGTTTTGGTTCTCATTTGTGGCAGGTTAGTTTCGGACTGGGTGATTCGAATTGCAGTGTTCTTCATCGAAAGGAATTTCCTGCTGCGTAAGAGGGTGCTGTACTTTGTGTATGGGGTGAAGAAGGCAGTTCAGAATTGCCTCTGGTTGGGCCTCGTCTTAATTGCATGGCACTCTCTGTTCGATCAAAAAGTCGAAAGGGAGACAAAAAACGACTTCCTAGAATATGTGACCAAGGTGTTGATCTGCTTCTTAGTGGGTACTCTGGTGTGGCTGGTGAAAACTCTGATGGTGAAGGTTCTGGCTTCTTCATTCCACGTGAGCACCTATTTCGACAGGATACAGGAATCGTTGTTCAATCAGTTTGTGATCGAAACACTTTCGGGGCCGCCATTGGTGGAGATTCGGAGGCAGGAGGAGGAGGAGGAGAAGCTTGCGGAAGAGGTGATGAAGCTACAGAATGCAGGAATCACCATACCTCCTGATTTGAGGGCATCGGCCTTCTCTTCTCTCAATAAGAGCCCAAAGGTGAACAGGAGCGGGATGCTTCTCAAGAGTCCTCATCTGAAAAGTGGCAAGTTTTCTCGACCACTGTCCAAGAAATCAGATGATGGCATAACCATTGATTACTTACATAAGTTGAATCCCAGGAATGTGTCTGCGTGGAATATGAAAAGGTTGATGAACATTGTGCGACACGGTGCTCTTTCCACGCTTGACGAGCAGATACAAGGTTCAACCCATGAAGAAGACGAACATATCACGCAGATACGCAGTGAGAATGAGGCCAAAGCAGCAGCCAAAAAGATATTTCAGAATGTCACCAGGCGGGGATCCAGGTTTATATACCTAGAGGACTTGTTGCGCTTTATGAGAGAAGATGAAGCTGTCAAAACCTTTAGTCTATTCGAAGGAGCGCCTGACACGGGGAAAATAAACAAATCAGCCTTGAAGAACTGGGTGGTGAACGCGTTCAGAGAAAGGAGAGCGCTTGCTTTGACGTTGAATGACACGAAAACGGCAGTAAACAAACTTCATCGAATGCTCAATTTTTTAGTGGCCATTATCATTCTCATTATTTGGCTCTTACTACTGGAAATCGCCACCAGCAAATTTCTTGTCGTCGTGAGCTCCCAGCTCGTTCTGGCCGCATTCATATTTGGAAATACCTGCAAGACCGTATTTGAAGCCATCATCTTCTTATTTGTCATGCACCCTTTTGATGTGGGAGACAGATGCGAAATTGATGGCATCCAGATGATTGTGGAAGAAATGAACATATTGACGACCATATTTCTGAGATACGACAATTTGAAGGTAATGATCCCTAACAGCGTTCTTGCTACCAAGCCAATATATAATTTCTACCGGAGTCCCGATATGGGGGAAGCTGCGGAGTTCTTAGTACATTTTTCTACCCCACCCGAAAAGATCACACTCATCATAAACAAAATACATAGTTACATCGAAAGCAAGAAAGAGTTCTGGTATCCCTCACCTATGATAGTGTACAAGGACGTTGACCAACTGAACATGATAAGAATAGCAGTGTGGCCAAGTCACAGAATGAACCACCAAGACATGGGGGAAAGGTTTGTCAGAAGATCCCTTCTGATTGAAGAGATGATCAAGATCTTCCGCGAGATCGACGTCCATTTCCGGCTCCTTCCCCTCGATATCAGCGTTCGGAGCATGCCCACCACCTCCGACCGCCTTCCTCCCAGTTGGGTCACCGCCACCACTCAGACTTGA 2847 0.484 MDFALRKSFKSYGSYKRSPRLSAGDSADAGREEIPILFQQDSSPEHNLLNQAHATSSSAMTSTDSPTYSGEVIVKIDDSDPKSSKAAFSQGESKIRRDPSCDLWKEGDVIATRHEQSFDFQQPGPKADDPPSKLIGKFLHRQQLSGDMSLDMDLEMDELQHDPYKTYLPPLDETASLSFSRELKVSFEEPPPNSADEPGDSFRRRYNNTPVMDEFPKPPQPDRRGSAQNINAANGDGEVVRCTSNASFERNLSLQRKSGLLRAKTKSRLIDPPDEPERKSGRVQKSGQMLSGLQAGNNKKGEEEEEDPFLEEDLPDDFKKTKFSIWVLLEWLSLISIVAALITTLCIPFLRGKNLWKLKLWKWEVMVLVLICGRLVSDWVIRIAVFFIERNFLLRKRVLYFVYGVKKAVQNCLWLGLVLIAWHSLFDQKVERETKNDFLEYVTKVLICFLVGTLVWLVKTLMVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIRRQEEEEEKLAEEVMKLQNAGITIPPDLRASAFSSLNKSPKVNRSGMLLKSPHLKSGKFSRPLSKKSDDGITIDYLHKLNPRNVSAWNMKRLMNIVRHGALSTLDEQIQGSTHEEDEHITQIRSENEAKAAAKKIFQNVTRRGSRFIYLEDLLRFMREDEAVKTFSLFEGAPDTGKINKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVAIIILIIWLLLLEIATSKFLVVVSSQLVLAAFIFGNTCKTVFEAIIFLFVMHPFDVGDRCEIDGIQMIVEEMNILTTIFLRYDNLKVMIPNSVLATKPIYNFYRSPDMGEAAEFLVHFSTPPEKITLIINKIHSYIESKKEFWYPSPMIVYKDVDQLNMIRIAVWPSHRMNHQDMGERFVRRSLLIEEMIKIFREIDVHFRLLPLDISVRSMPTTSDRLPPSWVTATTQT 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4895g00019 948 MobiDBLite consensus disorder prediction 114 133 - -
Pral4895g00019 948 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 44 941 IPR016688 -
Pral4895g00019 948 FunFam Predicted mechanosensitive ion channel 771 820 - -
Pral4895g00019 948 SUPERFAMILY Sm-like ribonucleoproteins 761 820 IPR010920 -
Pral4895g00019 948 MobiDBLite consensus disorder prediction 267 282 - -
Pral4895g00019 948 MobiDBLite consensus disorder prediction 182 238 - -
Pral4895g00019 948 Gene3D - 771 820 IPR023408 -
Pral4895g00019 948 MobiDBLite consensus disorder prediction 40 69 - -
Pral4895g00019 948 MobiDBLite consensus disorder prediction 224 238 - -
Pral4895g00019 948 PIRSF Memb_At2g17000 38 948 IPR016688 -
Pral4895g00019 948 Pfam Mechanosensitive ion channel 713 917 IPR006685 GO:0016020|GO:0055085
Pral4895g00019 948 Coils Coil 500 520 - -
Pral4895g00019 948 MobiDBLite consensus disorder prediction 13 101 - -
Pral4895g00019 948 MobiDBLite consensus disorder prediction 263 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4895g00019 Pral-Chr4895 102114 106312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4895g00019 71 941 Mechanosensitive Ion Channel Family AT1G78610 56.604 0.0 916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4895g00019 K22048 - gmx:102665658 1195.65