Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4894g00003 ATGTTATCACAGTTAATGAACCTTCTACAGGCCTGCTTGTGGCCACGTTCCGATCAAAATGCACGTACATGTTCAGATGCTGGAGGTCGACAAGATGGATTGTTGTGGTACAGAGACTCGGGGCAGCACTTGAGCGGTGACTTTTCAATGGCCGTGGTCCAAGCCAATAACTTGCTGGAGGATCAGAGCCAGATTGAATCGGGCAGTTTGAGCACCAGTGAATCTGGTCCTTATGGTACCTTTGTTGGTGTTTATGATGGACATGGAGGCCCTGAGACATCACGGTTTGTTAATGATAACCTCTTTCACCATCTTAAGAGGTTTGCTGCGGAGCAGCAATCAATGTCAGTTGATGTAATTCGCAAGGCACTTCAAGCTACAGAAGAGGGATTTATGTCTCTTGTTGCCAGACAGTGGCCAATGAAACCACAAATCGCAGCTGTTGGGTCATGCTGTCTAGTTGGTGTTATTTGTAATGGAACCCTTTATGTAGCTAATCTTGGTGATTCAAGAGCTGTTTTGGGAAGAGTGGTCAAGGCAACTGGGGACGTACTAGCTTTGCAACTGTCAACGGAGCACAATGTGGGGATAGAGTCTGTAAGACAGGAGCTGCATTCTTTGCACCCTGATGACAAACAGATTGTTGTTTTGAAGCATAATGTATGGCGTGTGAAGGGCCTTATACAAGTTTCAAGATCTATTGGTGACGTTTATTTGAAAAAGGCCGAGTTCAATAGAGAACCTCTATATGCTAAGTTTCGACTTCGGGAGCCATTCAAGAGGCCAATACTGAGTTCAGAACCATCAATATCAGTGACCCAATTGCAGCCACATGATCAATTTATTATATTTGCATCTGATGGGCTCTGGGAGCACCTTAGCAATCAAGATGCAGTTGATATAGTTAAAAATAATCCTCATAGGGGAAGTGCGAGGAGGCTGGTGAAAGCTGCCCTTCAAGAAGCAGCAAAGAAGAGAGAAATGAGATATTCAGACCTAAAGAAGATTGATCGTGGGGTTCGTCGACATTTCCATGATGATATAACTGTGATTGTTGTGTTCCTGGATTCGAATATCCTGAGTAAGGCAAGCTTTGTGAGGTTCAATAGTATATCTGTTAGAGGTGGTGGCATCAACTTGCCTCCTAACACACTGGCACCTTGTATGACACCAGCAGAGACTGGTGGTACCTGA 1194 0.4464 MLSQLMNLLQACLWPRSDQNARTCSDAGGRQDGLLWYRDSGQHLSGDFSMAVVQANNLLEDQSQIESGSLSTSESGPYGTFVGVYDGHGGPETSRFVNDNLFHHLKRFAAEQQSMSVDVIRKALQATEEGFMSLVARQWPMKPQIAAVGSCCLVGVICNGTLYVANLGDSRAVLGRVVKATGDVLALQLSTEHNVGIESVRQELHSLHPDDKQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPFKRPILSSEPSISVTQLQPHDQFIIFASDGLWEHLSNQDAVDIVKNNPHRGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNILSKASFVRFNSISVRGGGINLPPNTLAPCMTPAETGGT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4894g00003 397 CDD PP2Cc 48 355 IPR001932 -
Pral4894g00003 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Pral4894g00003 397 SMART PP2C_4 37 353 IPR001932 -
Pral4894g00003 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Pral4894g00003 397 Gene3D - 36 364 IPR036457 -
Pral4894g00003 397 Pfam Protein phosphatase 2C 77 324 IPR001932 -
Pral4894g00003 397 PANTHER PROTEIN PHOSPHATASE 39 353 IPR015655 GO:0004722|GO:0006470
Pral4894g00003 397 FunFam Phosphatase 2C family protein 36 365 - -
Pral4894g00003 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4894g00003 Pral-Chr4894 23584 28034 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4894g00003 1 396 PP2C-type Phosphatase Gene Family AT4G38520 74.747 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4894g00003 - K01102 jre:109006616 687.182