Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4891g00054 ATGGGAAGGTCTCCCTGTTGTGAGAAAGCCCACACCAACAAAGGTGCTTGGACCAAAGAAGAAGACGATCGCCTCATCGCTTATATCCGAGCTCATGGCGAGGGTTGCTGGCGCTCCCTCCCCAAGGCCGCCGGCCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATCAACTACCTCCGCCCCGACCTTAAACGCGGCAATTTCACTGAGGAAGAAGACGAGCTCATCATCAAACTCCATAGTCTTCTCGGTAACAAGTGGTCTCTAATAGCCGGACGATTGCCGGGAAGAACAGACAATGAGATAAAGAACTACTGGAACACCCACATCAGAAGGAAGCTTCTGAACAGAGGAATCGACCCTTCCACTCACAGGCCTCTGAATGAGTCCCCCAATTCCGCCCAGAACAATCAAGAAGCCACCACCATCTCTTTCGCCTCCCATGTCAAACAAGAGAGTGATGACAGCAAGGCGAACGTGTTTGCGGAGCTTTGCAGGGATGCGAAAAAGGGCGTCGCACTAGAACGATGCCCTGACCTCAACCTGGAGCTCACCATTAGTCCTCCTCATCAAAACCAGGAGGCGGAGGATGAAGTTCATCAGCCCATACTCAAGAGTGGTGGAGGAAGAAGAAGCCTTTGTTTCGCTTGCAGTTTGGGTTTGCAGAACAGCAAGGATTGCAGCTGTGGAATTGTTGGCAACATCAACGGCAGCACTAGTGGAAGTAGTAGCACTGGTGGGTATGATTTCTTGGGGTTGAAAAGTTCTGTTTTGGATTACAGAAGCTTGGAGATGAAATGA 807 0.5192 MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRGIDPSTHRPLNESPNSAQNNQEATTISFASHVKQESDDSKANVFAELCRDAKKGVALERCPDLNLELTISPPHQNQEAEDEVHQPILKSGGGRRSLCFACSLGLQNSKDCSCGIVGNINGSTSGSSSTGGYDFLGLKSSVLDYRSLEMK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4891g00054 268 FunFam Myb transcription factor 68 137 - -
Pral4891g00054 268 CDD SANT 69 112 IPR001005 -
Pral4891g00054 268 SMART sant 66 114 IPR001005 -
Pral4891g00054 268 SMART sant 13 63 IPR001005 -
Pral4891g00054 268 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pral4891g00054 268 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Pral4891g00054 268 MobiDBLite consensus disorder prediction 120 140 - -
Pral4891g00054 268 CDD SANT 16 61 IPR001005 -
Pral4891g00054 268 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pral4891g00054 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pral4891g00054 268 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pral4891g00054 268 FunFam MYB-related transcription factor 13 66 - -
Pral4891g00054 268 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Pral4891g00054 268 Gene3D - 68 148 - -
Pral4891g00054 268 Gene3D - 14 66 - -
Pral4891g00054 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pral4891g00054 268 MobiDBLite consensus disorder prediction 125 140 - -
Pral4891g00054 268 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4891g00054 Pral-Chr4891 354586 355819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4891g00054 1 268 MYB Transcription Factor Family AT4G38620 61.034 8.54e-113 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4891g00054 Myb_DNA-binding 3.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4891g00054 K09422 - zju:107404478 394.815