Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4891g00041 ATGGCTTCCTCTTCCTCCGCTTCTCTGTACGACGTGCTTGGGATCTCAGTGGGTGCCAGCTGCAACGAGATAAAAGCCGCTTACAGGAAGCTTGCGAGAACTTGTCATCCTGATGTGGTGGCCATGAATCAGAAGGAAACCTCGGCCAACGAGTTCATGAAGATCCATTCGGCTTATTCCACGTTGTCGGATCCCAACAAGCGGGCACAATATGACAGGCAATTCTATGGCCATAACAATAGAAGGCCTCTCGACTATACGTCTCTTACTTCTTCAAACATAAATTCGATGTCTGGGTATCGTCCTAGCTATGCTCACTCTGGAATGAACTGGGAGACTGATCAGTGTTGGTAG 354 0.4859 MASSSSASLYDVLGISVGASCNEIKAAYRKLARTCHPDVVAMNQKETSANEFMKIHSAYSTLSDPNKRAQYDRQFYGHNNRRPLDYTSLTSSNINSMSGYRPSYAHSGMNWETDQCW 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4891g00041 117 ProSiteProfiles dnaJ domain profile. 8 75 IPR001623 -
Pral4891g00041 117 PRINTS DnaJ domain signature 47 67 IPR001623 -
Pral4891g00041 117 PRINTS DnaJ domain signature 10 28 IPR001623 -
Pral4891g00041 117 PRINTS DnaJ domain signature 28 43 IPR001623 -
Pral4891g00041 117 CDD DnaJ 10 64 IPR001623 -
Pral4891g00041 117 Pfam DnaJ domain 9 72 IPR001623 -
Pral4891g00041 117 Gene3D DnaJ domain 1 96 IPR036869 -
Pral4891g00041 117 ProSitePatterns Nt-dnaJ domain signature. 52 71 IPR018253 -
Pral4891g00041 117 SUPERFAMILY Chaperone J-domain 5 78 IPR036869 -
Pral4891g00041 117 SMART dnaj_3 7 67 IPR001623 -
Pral4891g00041 117 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 2 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4891g00041 Pral-Chr4891 275523 276402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4891g00041 1 72 C2H2 Transcription Factor Family AT1G74250 43.038 4.11e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4891g00041 - - pcin:129292702 204.142