Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4891g00010 ATGGGCTTTCGTTTGCCTAGTATCAGAAGGAATTCATCTCTGAAAGGAGTTCACGTGCCCAAGGGCTATCTTATTGTCTATGTTGGAGAGAAAATGAAGAGATTTGTGATTCCCGTATCGTACTTGAACCAGCCAGCATTTCAAGATTTGCTGAGTCAAGCTGAGGAAGAGTTTGGTTTTGATTCTCCAATGGGTGGCCTCACAATTCCTTGCGAAGAATATGCCTTTGAGACTATTCAGGACTTTCTCTCCTTGAAAAACCAAATGGGTTTTCGTTTACCTGGAATTAGAAGGGCTTCTTCATTTTCAAGAAACCTTGCATCTTCAAAAGGAGTCGATGTGCCAAAGGGCCATCTTGCAGTCTATGTTGGAGAGAAGATGAGGAGGTTTGTGATTCCCATATCATACTTGAACCAACCTGCATTCCAAGATTTGCTGAGTCAAGCTGAGGAAGAGTTTGGTTATGATCATCCAATGGGTGGCCTCACAATTCCTTGCACTGAAGATGCCTTTGAGAATATAACTTCCTGCTTGAATGGCTGTTGA 546 0.4267 MGFRLPSIRRNSSLKGVHVPKGYLIVYVGEKMKRFVIPVSYLNQPAFQDLLSQAEEEFGFDSPMGGLTIPCEEYAFETIQDFLSLKNQMGFRLPGIRRASSFSRNLASSKGVDVPKGHLAVYVGEKMRRFVIPISYLNQPAFQDLLSQAEEEFGYDHPMGGLTIPCTEDAFENITSCLNGC 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4891g00010 181 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 105 178 IPR003676 GO:0009733
Pral4891g00010 181 Pfam Auxin responsive protein 98 178 IPR003676 GO:0009733
Pral4891g00010 181 Pfam Auxin responsive protein 16 80 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4891g00010 Pral-Chr4891 84481 86865 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4891g00010 19 77 Calmodulin-binding Proteins AT5G20810 59.322 1.47e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4891g00010 - K14488 pcin:129286196 241.121