Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4891g00005 ATGGCCGCTTCCAATCTCTCCACCTTCTCTTCGTCACTTTCAAAAACCTCTGCTTTCCCTCTAAACAAGTCTCACGCCCACACTTCTTTCTCTGCTCAAACCCTCGCGAACGCCTCTTTCTTTCTCAACCCGAATGCTCCTCACAAATCCTCTTTCGTGCTTTCTTCCAAAAACCCACTTTCTGATACTGTCTCTGTAAATAAGCAATACCCAGAAGTTCAATTTGAAGATGCTGATGATGACGAAAAGCCTCGCGAGGAGTGTGGCGTCGTGGGTATATACGGCGACCCAGAAGCTTCTCGTCTCTGCTATTTAGCCCTGCACGCTCTGCAACACCGTGGACAAGAAGGTGCTGGAATTGTCGCTGTGAACAAGAACGTGCTTCAGTCGATAACTGGTGTTGGGCTTGTTTCCGATGTGTTTAACGAATCCAAGCTCGATCAATTGCCGGGAAGTTTGGCTATAGGGCATGTTCGATACTCCACTGCAGGTCAGTCGATGCTCAAGAATGTTCAGCCCTTTGTTGCCGGGTATCGATTTGGGTCTGTTGGGGTTGCTCATAATGGAAATTTGGTGAATTATCGAACGTTGAGAGCGAAGCTTGAAGATAGTGGGTCGATTTTTAACACCAGTTCTGATACTGAGGTTGTGCTCCATCTTATTGCTATTTCAAAGCACAGACCCTTTATATCGAGGATTGTTGATGCCTGCGAGAAGCTTGAAGGGGCTTATTCTATTGTTTTTGTTACAGAGGATAAGCTTGTTGCAGCGAGGGATCCATTTGGGTTTCGACCATTGGTTATGGGAAGAAGAAGTAATGGTGCTATTGTTTTTGCCTCTGAAACTTGTGCTCTTGATTTGATCGAAGCAACATATGAAAGGGAGGTTTTCCCAGGTGAAGTATTGGTGGTGGACAAAAATGGGCTTCAATCTCTGTGCTTAATGCCTCATCGACAACCAAAACAATGCATTTTTGAGCATATTTACTTTTCTCTTCCCAACTCTCTGGTTTTTGGAAGATCAGTGTATGAATCTCGGAGAAAATTTGGTGAAATTCTTGCCACAGAAACCCCAGTGGATTGTGATGTTGTGATTGCAGTTCCAGATTCTGGTGTGGTTGCTGCACTAGGGTATGCTGCAAAAGCTGGGGTTCCCTTTCAACAAGGTCTGATTAGATCTCACTATGTGGGAAGAACTTTCATTGAGCCATCACAGAAGATCAGAGACTTTGGTGTGAAGCTGAAACTCTCACCTGTTAGAGCTGTGCTTGAAGGCAAGAGGGTTGTGGTTGTCGATGATTCCATTGTAAGAGGAACCACATCTTCTAAAATTGTGAGGTTGATTAAAGAAGCAGGCGCTAAGGAAGTTCACATGAGGATTGCAAGCCCACCGATTATTGCTTCATGCTATTACGGAGTGGACACCCCAAGTTCAGAGGAATTGATATCTAATAGGATGAGTGTGGAGGAAATCAGAGAGTTCATTGGGTCAGATTCACTTGCTTTTCTTCCACTTGATAGCTTGAAGAAGCTTCTGGGGAATGATTCTCCTAATTTCTGTTATGCTTGCTTTTCTGGAAAGTACCCTGTTGAGCCAAGAGAGCTTAAAGTGAAGAGGGTTGGTGATTTTGTGGACGATGGATTGAATGGGAGCTTGGAATCCATTGATGGAGGTTGGGTTCAAGCAAACCCGAATCAGAGAGAGATCAAAGTGGGAAGTTTCTGA 1725 0.4458 MAASNLSTFSSSLSKTSAFPLNKSHAHTSFSAQTLANASFFLNPNAPHKSSFVLSSKNPLSDTVSVNKQYPEVQFEDADDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVAVNKNVLQSITGVGLVSDVFNESKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKLEDSGSIFNTSSDTEVVLHLIAISKHRPFISRIVDACEKLEGAYSIVFVTEDKLVAARDPFGFRPLVMGRRSNGAIVFASETCALDLIEATYEREVFPGEVLVVDKNGLQSLCLMPHRQPKQCIFEHIYFSLPNSLVFGRSVYESRRKFGEILATETPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLIKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGSDSLAFLPLDSLKKLLGNDSPNFCYACFSGKYPVEPRELKVKRVGDFVDDGLNGSLESIDGGWVQANPNQREIKVGSF 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4891g00005 574 CDD PRTases_typeI 350 461 IPR000836 -
Pral4891g00005 574 Hamap Amidophosphoribosyltransferase [purF]. 87 528 IPR005854 GO:0004044|GO:0009113
Pral4891g00005 574 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 88 307 IPR017932 -
Pral4891g00005 574 SUPERFAMILY PRTase-like 323 534 IPR029057 -
Pral4891g00005 574 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 88 311 IPR029055 -
Pral4891g00005 574 Gene3D - 347 511 IPR029057 -
Pral4891g00005 574 NCBIfam amidophosphoribosyltransferase 88 529 IPR005854 GO:0004044|GO:0009113
Pral4891g00005 574 Pfam Phosphoribosyl transferase domain 346 457 IPR000836 -
Pral4891g00005 574 CDD GPATase_N 88 338 IPR035584 -
Pral4891g00005 574 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 88 529 IPR029055 -
Pral4891g00005 574 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 86 535 - -
Pral4891g00005 574 Pfam Glutamine amidotransferase domain 166 285 IPR017932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4891g00005 Pral-Chr4891 45549 47712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4891g00005 75 561 PRT Gene Family AT2G16570 85.685 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4891g00005 K00764 - jre:108986942 941.799