Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral488g00009 ATGGCTTCCATGAACTCTGCTGTGCTTGCTTCTACCTACGCCATATCTGGTGTGGCTTCTTCTGAATTCAACCCCAAGCACACTTCCATGGCGGTGTCTTCCCCCAAATTGCCGGTCATCAAGGCCCAGCAAGCCTCCTCGTCCGCCGGTCCTCAAGGAAGAAGAGCCGCTCTTTCTCTGTTAGCCGCTACCGTGTTTACAGCCGCCGCCGCGTCTTCTTCTGCAAACGCCGGCGTCATTGAAGAATACCTCGAGAGAAGCAAGGCCAACAAGGAATTGAATGATAAGAAGAGATTAGCGACAAGCGGCGCGAATTTCGCGAGGGCTTACACAGTGGAATTTGGGAGCTGCAAGTTCCCTGAGAACTTCACTGGCTGCCAAGATCTTGCGAAGCAAAAGAAAGTGCCATTCCTGAGTGAAGATTTGGACCTGGAATGCGAAGGGAAGGACAAGTACAAGTGTGGATCTAATGTTTTCTGGAAATGGTGA 489 0.5133 MASMNSAVLASTYAISGVASSEFNPKHTSMAVSSPKLPVIKAQQASSSAGPQGRRAALSLLAATVFTAAAASSSANAGVIEEYLERSKANKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFLSEDLDLECEGKDKYKCGSNVFWKW 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral488g00009 162 Gene3D - 78 162 IPR044907 -
Pral488g00009 162 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 162 IPR008796 GO:0009522|GO:0015979
Pral488g00009 162 FunFam Photosystem I reaction center subunit N 78 162 - -
Pral488g00009 162 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 39 162 IPR008796 GO:0009522|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral488g00009 Pral-Chr488 55366 56285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral488g00009 1 133 Calmodulin-binding Proteins AT5G64040 64.789 1.58e-57 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral488g00009 K02701 - nnu:104606730 236.113