Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral488g00004 ATGGGGGCGCAGAGCCTCCTGATCCTGATATTCTTGAAATTGACCCAACTTGTCGCTACATTAGGTTATAGGGCATTTGATGAAGTCAGTGGACTTGAAGTGGCCTGGAACCAGGTTCGGATTGATGAGGTGCTGCAGTCACCCGGTGACTTGGAAAGGCTCTACTCAGAGGTGCATCTCTTAAAGTCACTGACAAACAACAACATTGTAAAATTCTACAATTCCTGGATTGATGATAAGAACAAGACTGTCAACATCATTACTGAATTGTTCTCCTCGGGCAGCCTCAGACAGTATCGTAGGAAGCACAAGAAGGTTGACATGAAGGCTCTCAAAGGATGGGCAAGACAGATTTTGATGGGTTTAAACTACCTCCATAATCACAACCCACCTATTATACATAGGGATCTGAAGTGTGATAATATATTTATCAATGGAAACCAAGGTGAAGTTAAAATTGGAGATTTGGGGCTGGCAACTTTCTTGGAACGGACTAATGCTGAGAGTGTGATTGGAACCCCTGGATTTATGGCACCTGAGCTGTATGATGAAAATTACAATGAATTGGCCGACATATATTCTTTTGGAATGTGCATGCTTGAGTTGGTGACTTCTGAATACCCATATAGTGAATGTAAAAACTCAGCTCAGATATACAAGAAGGTTTCATCGGGTATAAAACCTGCTTCACTTTCTAAAGTCAAAGATCCAGAAATGAAATTATTTATTGACAAATGTCTAGTCCCAGCGTCTCAAAGAATGTCGGCAAAGGAGCTTCTAATGGACCCTTTCCTTCAAATTAATAGTTTGGCAAGAAATCGTCGTCTATCATTACCCGATATTGTTATCCCTAAATTTGGAGCCTTTGGAGATCGTATTCTTGTTTCAGAAGGCCCTGCTACTCAACGTAATGGATCAAATTCTCTGGATCTTGATGAGACTTGTGAATTACCTGTGATCACTATATATGATGGTTCCGGTGATGCTTCACATTCTCCATGTGTTGAGATACGGAAGTCGAAGAGAGGTGATATTTTCACTCTAAAAGGTGAAGAAAGTGATGAGAATTCTGTATCAATAGTTCTTCGGATAGCTGATCAAGGCGGTCGAGCGAGAAATATTCATTTCCTATTCTACCTTGATAGTGATACTGCTATTTCCGTTTCAAGTGAAATGGTTGAGCAACTCGAACTTTCAGATCAAAATGTACAGCTCATAGCTGAGTTGATAGACTTGTTATTGATTAATTTGGTTCCCAATTGGAAACCTTGTGTAGATATTGCTCACTTGGTTTCACGAAGTTGTAAAAGAACTATTGCTGGAGAAAAAGATTTGGAATCGGCAAAACTAAAACAACTTTATGAAGATTCCATGCAAAATATTACTGAAGAGAGAGGTATCTCACACTCAATCAGAAGGTCAGTTTCATCAGAAATCCATTATCACTCTAACTTGGGTGAATTTTCATCCCCTGCCAACATAGATGTGGGAAATACAATTAAAATAGATGATTTGTGTTCTAAGATTTCACGTGTTTCTATAACATCTGACGTTAACGATAAGAAGTTGTCTTTAGTTTCATTTTTATCGGTGGAGTCAGCATTTAATGACTTCAACTTGTCGAGAGTACCAGGTGAATCTGAGTGCTCTTTTATATCTACAATGGAAGCATGGCCTGATACTCGTAGAAGTAAGACTTCAGAATTAGGAAGTCATGATATGTTGAACTTCCCAACCCATTCTAGTAGTCCTTCTTTATCTAATGTAGAAGATGGGTTGAAAATAGAGTTAGATATAATGAACAGAAATACTTAG 1815 0.3879 MGAQSLLILIFLKLTQLVATLGYRAFDEVSGLEVAWNQVRIDEVLQSPGDLERLYSEVHLLKSLTNNNIVKFYNSWIDDKNKTVNIITELFSSGSLRQYRRKHKKVDMKALKGWARQILMGLNYLHNHNPPIIHRDLKCDNIFINGNQGEVKIGDLGLATFLERTNAESVIGTPGFMAPELYDENYNELADIYSFGMCMLELVTSEYPYSECKNSAQIYKKVSSGIKPASLSKVKDPEMKLFIDKCLVPASQRMSAKELLMDPFLQINSLARNRRLSLPDIVIPKFGAFGDRILVSEGPATQRNGSNSLDLDETCELPVITIYDGSGDASHSPCVEIRKSKRGDIFTLKGEESDENSVSIVLRIADQGGRARNIHFLFYLDSDTAISVSSEMVEQLELSDQNVQLIAELIDLLLINLVPNWKPCVDIAHLVSRSCKRTIAGEKDLESAKLKQLYEDSMQNITEERGISHSIRRSVSSEIHYHSNLGEFSSPANIDVGNTIKIDDLCSKISRVSITSDVNDKKLSLVSFLSVESAFNDFNLSRVPGESECSFISTMEAWPDTRRSKTSELGSHDMLNFPTHSSSPSLSNVEDGLKIELDIMNRNT 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral488g00004 604 CDD STKc_WNK 23 265 - -
Pral488g00004 604 Gene3D Transferase(Phosphotransferase) domain 1 91 271 - -
Pral488g00004 604 Pfam Protein kinase domain 25 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral488g00004 604 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 23 472 - -
Pral488g00004 604 ProSiteProfiles Protein kinase domain profile. 1 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral488g00004 604 SMART serkin_6 15 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral488g00004 604 Gene3D - 356 446 - -
Pral488g00004 604 FunFam Probable serine/threonine-protein kinase WNK1 15 89 - -
Pral488g00004 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Pral488g00004 604 SUPERFAMILY Protein kinase-like (PK-like) 23 266 IPR011009 -
Pral488g00004 604 Gene3D Phosphorylase Kinase; domain 1 18 89 - -
Pral488g00004 604 FunFam probable serine/threonine-protein kinase WNK9 91 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral488g00004 Pral-Chr488 2186 6021 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral488g00004 108 431 MAP Kinase Kinase Kinase AT1G49160 69.136 5.58e-167 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pral488g00004 Pkinase 7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral488g00004 K08867 - gmx:121175054 700.664