Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral488g00002 ATGAGTGTGGCGAAGGCAGGAAGCTCAGGGGAGTGTAATGGGGGCGCAGAGCCTCCTGATCCTGATATTCTTGAAATTGACCCAACTTGTCGCTACATTAGGTATAAAGATGTGATCGGCAAAGGTGCTTTCAAGACATGTTATAGGGCATTTGATGAAGTCAGTGGACTTGAAGTGGCCTGGAACCAGGTTCGGATTGATGAGGTGCTGCAGTCACCCGGTGACTTGGAAAGGCTCTACTCAGAGGTGCATCTCTTAAAGTCACTGACAAACAACAACATTGTAAAATTCTACAATTCCTGGATTGATGATAAGAACAAGACTGTCAACATCATTACTGAATTGTTCTCCTCGGGCAGCCTCAGACAGTATCGTAGGAAGCACAAGAAGGTTGACATGAAGGCTCTCAAAGGATGGGCAAGACAGATTTTGATGGGTTTAAACTACCTCCATAATCACAACCCACCTATTATACATAGGGATCTGAAGTGTGATAATATATTTATCAATGGAAACCAAGGTGAAGTTAAAATTGGAGATTTGGGGCTGGCAACTTTCTTGGAACGGACTAATGCTGAGAGTGTGATTGGAACCCCTGGATTTATGGCACCTGAGCTGTATGATGAAAATTACAATGAATTGGCCGACATATATTCTTTTGGAATGTGCATGCTTGAGTTGGTGACTTCTGAATACCCATATAGTGAATGTAAAAACTCAGCTCAGATATACAAGAAGGTTTCATCGGGTATAAAACCTGCTTCACTTTCTAAAGTCAAAGATCCAGAAATGAAATTATTTATTGACAAATGTCTAGTCCCAGCGTCTCAAAGAATGTCGGCAAAGGAGCTTCTAATGGACCCTTTCCTTCAAATTAATAGTTTGGCAAGAAATCGTCGTCTATCATTACCCGATATTGTTATCCCTAAATTTGGAGCCTTTGGAGATCGTATTCTTGTTTCAGAAGGCCCTGCTACTCAACGTAATGGATCAAATTCTCTGGATCTTGATGAGACTTGTGAATTACCTGTGATCACTATATATGATGGTTCCGGTGATGCTTCACATTCTCCATGTGTTGAGATACGGAAGTCGAAGAGAGGTGATATTTTCACTCTAAAAGGTGAAGAAAGTGATGAGAATTCTGTATCAATAGTTCTTCGGATAGCTGATCAAGGCGGTCGAGCGAGAAATATTCATTTCCTATTCTACCTTGATAGTGATACTGCTATTTCCGTTTCAAGTGAAATGGTTGAGCAACTCGAACTTTCAGATCAAAATGTACAGCTCATAGCTGAGTTGATAGACTTGTTATTGATTAATTTGGTTCCCAATTGGAAACCTTGTGTAGATATTGCTCACTTGGTTTCACGAAGTTGTAAAAGAACTATTGCTGGAGAAAAAGATTTGGAATCGGCAAAACTAAAACAACTTTATGAAGATTCCATGCAAAATATTACTGAAGAGAGAGGTATCTCACACTCAATCAGAAGGTCAGTTTCATCAGAAATCCATTATCACTCTAACTTGGGTGAATTTTCATCCCCTGCCAACATAGATGTGGGAAATACAATTAAAATAGATGATTTGTGTTCTAAGATTTCACGTGTTTCTATAACATCTGACGTTAACGATAAGAAGTTGTCTTTAGTTTCATTTTTATCGGTGGAGTCAGCATTTAATGACTTCAACTTGTCGAGAGTACCAGGTGAATCTGAGTGCTCTTTTATATCTACAATGGAAGCATGGCCTGATACTCGTAGAAGTAAGACTTCAGAATTAGGAAGTCATGATATGTTGAACTTCCCAACCCATTCTAGTAGTCCTTCTTTATCTAATGTAGAAGATGGGTTGAAAATAGAGTTAGATATAATGAACAGAAATACTTAG 1890 0.3915 MSVAKAGSSGECNGGAEPPDPDILEIDPTCRYIRYKDVIGKGAFKTCYRAFDEVSGLEVAWNQVRIDEVLQSPGDLERLYSEVHLLKSLTNNNIVKFYNSWIDDKNKTVNIITELFSSGSLRQYRRKHKKVDMKALKGWARQILMGLNYLHNHNPPIIHRDLKCDNIFINGNQGEVKIGDLGLATFLERTNAESVIGTPGFMAPELYDENYNELADIYSFGMCMLELVTSEYPYSECKNSAQIYKKVSSGIKPASLSKVKDPEMKLFIDKCLVPASQRMSAKELLMDPFLQINSLARNRRLSLPDIVIPKFGAFGDRILVSEGPATQRNGSNSLDLDETCELPVITIYDGSGDASHSPCVEIRKSKRGDIFTLKGEESDENSVSIVLRIADQGGRARNIHFLFYLDSDTAISVSSEMVEQLELSDQNVQLIAELIDLLLINLVPNWKPCVDIAHLVSRSCKRTIAGEKDLESAKLKQLYEDSMQNITEERGISHSIRRSVSSEIHYHSNLGEFSSPANIDVGNTIKIDDLCSKISRVSITSDVNDKKLSLVSFLSVESAFNDFNLSRVPGESECSFISTMEAWPDTRRSKTSELGSHDMLNFPTHSSSPSLSNVEDGLKIELDIMNRNT 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral488g00002 629 MobiDBLite consensus disorder prediction 1 20 - -
Pral488g00002 629 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral488g00002 629 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral488g00002 629 FunFam probable serine/threonine-protein kinase WNK9 116 295 - -
Pral488g00002 629 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Pral488g00002 629 Pfam Protein kinase domain 36 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral488g00002 629 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 19 497 - -
Pral488g00002 629 Gene3D Transferase(Phosphotransferase) domain 1 116 296 - -
Pral488g00002 629 FunFam Probable serine/threonine-protein kinase WNK1 18 114 - -
Pral488g00002 629 Gene3D - 381 471 - -
Pral488g00002 629 CDD STKc_WNK 31 290 - -
Pral488g00002 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Pral488g00002 629 SUPERFAMILY Protein kinase-like (PK-like) 35 291 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral488g00002 Pral-Chr488 2186 6033 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral488g00002 133 456 MAP Kinase Kinase Kinase AT1G49160 69.136 3.39e-166 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pral488g00002 Pkinase 5.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral488g00002 K08867 - gmx:121175054 751.125