Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral488g00001 ATGAGTGTGGCGAAGGCAGGAAGCTCAGGGGAGTGTAATGGGGGCGCAGAGCCTCCTGATCCTGATATTCTTGAAATTGACCCAACTTGTCGCTACATTAGGTATAAAGATGTGATCGGCAAAGGTGCTTTCAAGACATGTTATAGGGCATTTGATGAAGTCAGTGGACTTGAAGTGGCCTGGAACCAGGTTCGGATTGATGAGGTGCTGCAGTCACCCGGTGACTTGGAAAGGCTCTACTCAGAGGTGCATCTCTTAAAGTCACTGACAAACAACAACATTGTAAAATTCTACAATTCCTGGATTGATGATAAGAACAAGACTGTCAACATCATTACTGAATTGTTCTCCTCGGGCAGCCTCAGACAGAAGCACAAGAAGGTTGACATGAAGGCTCTCAAAGGATGGGCAAGACAGATTTTGATGGGTTTAAACTACCTCCATAATCACAACCCACCTATTATACATAGGGATCTGAAGTGTGATAATATATTTATCAATGGAAACCAAGGTGAAGTTAAAATTGGAGATTTGGGGCTGGCAACTTTCTTGGAACGGACTAATGCTGAGAGTGTGATTGGAACCCCTGGATTTATGGCACCTGAGCTGTATGATGAAAATTACAATGAATTGGCCGACATATATTCTTTTGGAATGTGCATGCTTGAGTTGGTGACTTCTGAATACCCATATAGTGAATGTAAAAACTCAGCTCAGATATACAAGAAGGTTTCATCGGGTATAAAACCTGCTTCACTTTCTAAAGTCAAAGATCCAGAAATGAAATTATTTATTGACAAATGTCTAGTCCCAGCGTCTCAAAGAATGTCGGCAAAGGAGCTTCTAATGGACCCTTTCCTTCAAATTAATAGTTTGGCAAGAAATCGTCGTCTATCATTACCCGATATTGTTATCCCTAAATTTGGAGCCTTTGGAGATCGTATTCTTGTTTCAGAAGGCCCTGCTACTCAACGTAATGGATCAAATTCTCTGGATCTTGATGAGACTTGTGAATTACCTGTGATCACTATATATGATGGTTCCGGTGATGCTTCACATTCTCCATGTGTTGAGATACGGAAGTCGAAGAGAGGTGATATTTTCACTCTAAAAGGTGAAGAAAGTGATGAGAATTCTGTATCAATAGTTCTTCGGATAGCTGATCAAGGCGGTCGAGCGAGAAATATTCATTTCCTATTCTACCTTGATAGTGATACTGCTATTTCCGTTTCAAGTGAAATGGTTGAGCAACTCGAACTTTCAGATCAAAATGTACAGCTCATAGCTGAGTTGATAGACTTGTTATTGATTAATTTGGTTCCCAATTGGAAACCTTGTGTAGATATTGCTCACTTGGTTTCACGAAGTTGTAAAAGAACTATTGCTGGAGAAAAAGATTTGGAATCGGCAAAACTAAAACAACTTTATGAAGATTCCATGCAAAATATTACTGAAGAGAGAGGTATCTCACACTCAATCAGAAGGTCAGTTTCATCAGAAATCCATTATCACTCTAACTTGGGTGAATTTTCATCCCCTGCCAACATAGATGTGGGAAATACAATTAAAATAGATGATTTGTGTTCTAAGATTTCACGTGTTTCTATAACATCTGACGTTAACGATAAGAAGTTGTCTTTAGTTTCATTTTTATCGGTGGAGTCAGCATTTAATGACTTCAACTTGTCGAGAGTACCAGGTGAATCTGAGTGCTCTTTTATATCTACAATGGAAGCATGGCCTGATACTCGTAGAAGTAAGACTTCAGAATTAGGAAGTCATGATATGTTGAACTTCCCAACCCATTCTAGTAGTCCTTCTTTATCTAATGTAGAAGATGGGTTGAAAATAGAGTTAGATATAATGAACAGAAATACTTAG 1881 0.3913 MSVAKAGSSGECNGGAEPPDPDILEIDPTCRYIRYKDVIGKGAFKTCYRAFDEVSGLEVAWNQVRIDEVLQSPGDLERLYSEVHLLKSLTNNNIVKFYNSWIDDKNKTVNIITELFSSGSLRQKHKKVDMKALKGWARQILMGLNYLHNHNPPIIHRDLKCDNIFINGNQGEVKIGDLGLATFLERTNAESVIGTPGFMAPELYDENYNELADIYSFGMCMLELVTSEYPYSECKNSAQIYKKVSSGIKPASLSKVKDPEMKLFIDKCLVPASQRMSAKELLMDPFLQINSLARNRRLSLPDIVIPKFGAFGDRILVSEGPATQRNGSNSLDLDETCELPVITIYDGSGDASHSPCVEIRKSKRGDIFTLKGEESDENSVSIVLRIADQGGRARNIHFLFYLDSDTAISVSSEMVEQLELSDQNVQLIAELIDLLLINLVPNWKPCVDIAHLVSRSCKRTIAGEKDLESAKLKQLYEDSMQNITEERGISHSIRRSVSSEIHYHSNLGEFSSPANIDVGNTIKIDDLCSKISRVSITSDVNDKKLSLVSFLSVESAFNDFNLSRVPGESECSFISTMEAWPDTRRSKTSELGSHDMLNFPTHSSSPSLSNVEDGLKIELDIMNRNT 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral488g00001 626 MobiDBLite consensus disorder prediction 1 20 - -
Pral488g00001 626 CDD STKc_WNK 31 287 - -
Pral488g00001 626 ProSiteProfiles Protein kinase domain profile. 33 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral488g00001 626 Gene3D Transferase(Phosphotransferase) domain 1 117 293 - -
Pral488g00001 626 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Pral488g00001 626 FunFam Probable serine/threonine-protein kinase WNK1 18 114 - -
Pral488g00001 626 FunFam probable serine/threonine-protein kinase WNK9 116 292 - -
Pral488g00001 626 SMART serkin_6 33 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral488g00001 626 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 19 494 - -
Pral488g00001 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Pral488g00001 626 SUPERFAMILY Protein kinase-like (PK-like) 35 288 IPR011009 -
Pral488g00001 626 Pfam Protein kinase domain 36 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral488g00001 626 Gene3D - 378 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral488g00001 Pral-Chr488 2186 6033 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral488g00001 130 453 MAP Kinase Kinase Kinase AT1G49160 69.136 4.85e-166 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pral488g00001 Pkinase 5.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral488g00001 K08867 - gmx:121175054 742.651