Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4889g00003 ATGGCTCGCGCTCGGGATTTAAGCATGGGTTTGGTGCTTCTTGCTCTGCTAGTATCTTGCTTTCTTGTAGCTTCTGAATCAAGCAATGTTTATATTGTGTATATGGGAGACAGAAGCATGAACCTCAATGAACAAGACCTTCTTGAAGATTCTCACCTTCACATACTGTCAAACATTCTCGGAAGCAAAAGAGCTGCTAGGAACTCCATTCTGTACAGCTACAAACATGGATTTTCAGGATTTGCTGCTGTTTTAAGCCAGTCTCAAGCTAAACTCGTTGCAGATTTTCCAGGAGTTGTTCATGTAATTCCAAACAGAATTCTCAGTTTGCACACAACTAGAAGCTGGGATTTCTTGAGTGTAAAGCCAGATATTGTGAATGGAATTCTTTCAAAGTGTAAATCTGGAAAGGGCACTATCATTGGCATCTTGGACACTGGCATATGGCCTGAGTCAGAGAGCTTTATGGATGAGAATATGGATAATCCACCTTCTAGTTGGCGCGGCATATGCCAAGCAGGAGAGAATTTCAGCCACTCCCACTGTAATAGGAAAATCATTGGAGCTCGCTGGTACTACAGAGGCTATGAAGCTGAATTTGGGAAATTAAACACAAGCGATGGATCCGAATTCCTATCGCCACGAGACGCATCGGGCCATGGCACTCACACTTCATCAACAGCAGCAGGAGCATCAGTAGAGAATGCAAGCTTCATGGGACTAGCAAAAGGGTCAGCAAGAGGAGGTGCTCCTTCAGCTCACTTAGCTATCTACAAAATCTGCTGGTCTAATGGAGCTTGCAGCTCAGCTGATCTTCTTGCAGCATTTGATGATGCAATATTTGATGGGGTTAATGTTCTTTCTGTGTCTCTGGGATCATACCCTCCACTTCCCACTTATGTTGAGGATGTTTTGGCCATTGGATCTTTTCATGCTGTTGCTAGAGGAATTTCTGTGGTGTGTTCTGGTGGCAATTCTGGACCTTACCCTCAAACTGTCATAAACACTGCTCCTTGGATTCTTACTGTAGCTGCTAGCACTCTTGATAGAGCATTTCCTTCTATAATTACCTTGGGAAACAATCAAACCCTACAGGGTCAGAGTTTATATACAGGGAAGGACGTGAACAAGTTTTACCCCATTGTGTATGGAGAAGACATAGAATCTGAAGATTCGGATGGAGAAAGCGCAAGAAGCTGTGAAGCGGGAAGCCTGAATGCAACATTGGCTAAAGGAAAAGTAATTGTGTGTTTCCAATCTGGATCACAGAGATCAGCCGTGGGTGCTATAAGAACCGTAACGGAAGTCCAAGGTTCGGGTCTCATCTTTGCTCAGTTTCCTACTAAAGATGTTGCTTTGTCTTGGAGTATTCCCTCTGTCCAAGTTGACTTCATCACTGGAACTTCAGTACTCTCATACATGGAAGCTACCAGGAACCCTGTTGTGAAGTTCAGCAGGACCAAAACAACAGTGGGACAACAGATATCTCCAGAAGTGGCATTCTTCTCATCTAGAGGACCGAGTTCTCTGTCTCCTTCAGTGTTAAAGCCTGACATTGCAGCTCCGGGAGTTGATATTCTAGCAGCATGGTCGCCGGCTTCTTCTGATTACTTGCAAACTGATTATGCGGCTGTGAATGGATTCGTTCCTCTTCACTTCAAGATTGAATCAGGAACTTCAATGGCTTGCCCTCACGTTTCTGCCATTGTCGCACTTGTCAAATCTATTTATCCTGCCTGGTCTCCTGCTGCTATCAAATCTGCCATCATCACTACAGCTTCATTGACAAATGAGTACAACCTATATGTTGGAGCAGAGGGAGCTCCGCACAAGCAGGCTGATCCATTCGACTATGGAGGTGGACACGTTGATCCCAACAAAGCCACGAATCCTGGTCTCATATACGACTTAGGAACCTCAGATTATGTTCGTTTTCTTTGTTCTCTGGGCTATAACTACACTGCCATAACCTTAATGACCAAATCCCCCACTAAATGCCGTAAATCCCCCAAGTTCTTGCTCGATCTCAACCTCCCTTCTATCACCATTCCTGAGCTGATGAATAACCACCCTTTGACTGTGTCGAGAACAGTCACGAACGTAGGACCAGTGGAATCTACCTACGTTGCTCGTGTTGTTGCTCCCATTGGAGTCTCTGTGACGGTTGTACCCCAAGTCTTAAAGTTTGATGCTACGAGGAAGAAACTGAAATTCAAGGTTACGTTTTTGCCCAACATTAATGTTGAAGGCGGTTTCTCGTTTGGGTATCTGTTCTGGGAAGATGGCTCACATGAAGTGAGGATACCTTTGGTAGTCCGAACTGTTGTTGACCAGTTTTACGCAGACGCATAG 2352 0.4477 MARARDLSMGLVLLALLVSCFLVASESSNVYIVYMGDRSMNLNEQDLLEDSHLHILSNILGSKRAARNSILYSYKHGFSGFAAVLSQSQAKLVADFPGVVHVIPNRILSLHTTRSWDFLSVKPDIVNGILSKCKSGKGTIIGILDTGIWPESESFMDENMDNPPSSWRGICQAGENFSHSHCNRKIIGARWYYRGYEAEFGKLNTSDGSEFLSPRDASGHGTHTSSTAAGASVENASFMGLAKGSARGGAPSAHLAIYKICWSNGACSSADLLAAFDDAIFDGVNVLSVSLGSYPPLPTYVEDVLAIGSFHAVARGISVVCSGGNSGPYPQTVINTAPWILTVAASTLDRAFPSIITLGNNQTLQGQSLYTGKDVNKFYPIVYGEDIESEDSDGESARSCEAGSLNATLAKGKVIVCFQSGSQRSAVGAIRTVTEVQGSGLIFAQFPTKDVALSWSIPSVQVDFITGTSVLSYMEATRNPVVKFSRTKTTVGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVDILAAWSPASSDYLQTDYAAVNGFVPLHFKIESGTSMACPHVSAIVALVKSIYPAWSPAAIKSAIITTASLTNEYNLYVGAEGAPHKQADPFDYGGGHVDPNKATNPGLIYDLGTSDYVRFLCSLGYNYTAITLMTKSPTKCRKSPKFLLDLNLPSITIPELMNNHPLTVSRTVTNVGPVESTYVARVVAPIGVSVTVVPQVLKFDATRKKLKFKVTFLPNINVEGGFSFGYLFWEDGSHEVRIPLVVRTVVDQFYADA 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4889g00003 783 CDD PA_subtilisin_like 356 483 - -
Pral4889g00003 783 Pfam Fibronectin type-III domain 675 772 IPR041469 -
Pral4889g00003 783 ProSitePatterns Serine proteases, subtilase family, serine active site. 558 568 IPR023828 -
Pral4889g00003 783 Gene3D - 349 491 - -
Pral4889g00003 783 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 772 IPR045051 -
Pral4889g00003 783 Pfam Subtilase family 136 594 IPR000209 GO:0006508|GO:0008236
Pral4889g00003 783 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 111 IPR037045 -
Pral4889g00003 783 FunFam Subtilisin-like protease SBT1.5 646 775 - -
Pral4889g00003 783 Gene3D - 646 776 - -
Pral4889g00003 783 SUPERFAMILY Subtilisin-like 26 697 IPR036852 GO:0004252|GO:0006508
Pral4889g00003 783 Gene3D Peptidase S8/S53 domain 138 642 IPR036852 GO:0004252|GO:0006508
Pral4889g00003 783 PRINTS Subtilisin serine protease family (S8) signature 557 573 IPR015500 -
Pral4889g00003 783 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Pral4889g00003 783 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Pral4889g00003 783 Pfam Peptidase inhibitor I9 30 111 IPR010259 -
Pral4889g00003 783 FunFam Subtilisin-like protease SBT1.5 138 361 - -
Pral4889g00003 783 FunFam Subtilisin-like protease SBT5.3 21 111 - -
Pral4889g00003 783 FunFam subtilisin-like protease SBT1.5 349 491 - -
Pral4889g00003 783 CDD Peptidases_S8_3 110 594 IPR034197 -
Pral4889g00003 783 ProSiteProfiles Serine proteases, subtilase domain profile. 115 629 - -
Pral4889g00003 783 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4889g00003 Pral-Chr4889 25460 30971 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4889g00003 1 782 Subtilisin-like Serine Gene Family AT4G10540 46.658 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4889g00003 - - ccaj:109818399 1165.6