Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4887g00058 ATGGGCGACGCACGGCGCGCAGGTTGTTGCCCGCCGGTGGATCTTTTCCGGTCGGAGCCGATGCAGCTGGTTCAGCTCATCATTCCTATGGAGTCCGCTCACCTTACTGTCTCCTACCTCGGTGATCTAGGTCTTCTTCAGTTCAAAGATCTCAATGTTGAGAAGAGCCCTTTTCAAAGGACTTACGCTAGTCAGCTAAAAAGATGTGGAGAGATGGCACGGAAATTACGATATTTCAAGGAGCAAATGTTCAAGGCTGGTGTTTCACCCACAACTTTGGATACTGATGTTGATGAGAACATGGATGATTTAGAGGTAAAACTTGCTGAGCTTGAGGCAGAATTAACTGAGATGAATGCAAATGGTGAAAAGTTGCAACGCTCTTACAATGAACTTGTGGAATATAAGCTCGTTCTTCAGAAGGCTAGCGAGTTTTTCCATTCAGCTCAGAATCGTGCCTTGGAGCAGCAGAGAGAAATTGAATCACATCAGAGTGGAGAGTCTATGGAAACACCATTATTACAAGATCAAGAAATGTCAACAGATCCATCAAAGCAAGTGAAGTTGGGTTTCCTAGCTGGTCTTGTTCCCAGGGAAAGATCCATGGCATTTGAGAGAATTTTATTTCGTGCTACTAGGGGCAATGTGTTTCTGAGGCAAGTCATTGTTGAGGATCCTGTCACAGACCCTGTTTCTGGAGAAAAGATTGAGAAAAATGTGTTTTTAGTCTTCTATGCTGGTGAAAGAGCAAAATCCAAGATTCTGAAAATATGTGATGCCTTTGGAGCAAATCGTTATCCTTTTGCCGAGGAATCAGGAAAACAAGTTCAAATGATTGCAGAGGTCTCAGCAAGACTCTCAGAGTTGAAGACAACTATAGATACTGGACTGCTGCACCAGGGTAACTTGCTCCAGATTATTGGGGATCAATTTAATCAGTGGAATCTTCTGGTGAGAAAGGAGAAATCCATATATCATACCCTGAACATGCTTAGCCTTGATGTGACCAAAAAATGCCTAGTGGCTGAGGGTTGGAGTCCTGTTTTTGCAACAAAGCAGATACAGGACGCCTTGGAGCGGGCAGCATATGACTCTAACTCCCAAGTTGGTACCATTTTCCAAGTTTTGCATTCTAGGGAGTTACCACCTACATATTTCCGAACAAATAAATTCACTTCTTCATTTCAATCCATTGTTGATGCATACGGGGTGGCTAAGTATCAGGAGGCAAATCCTGCTGTATATACTATAATTACCTTTCCATTTCTTTTTGCGGTAATGTTTGGTGATTGGGGGCATGGAATATGTTTACTACTGGCAACTTTGTATCTACTAATAAGGGAGAAAAAGTATTCTAGCCAGAAGCTTGGAGATATTATGGAAATGACTTTTGGAGGTCGTTATGTTATTCTGATGATGGCTCTCTTCTCAATCTTCACTGGTTTGATCTATAATGAGTTCTTCTCCGTCCCATTTGAACTCTTTGGTCCCTCAGCATATGCATGCCGTGACTTTTCTTGCAGAGATGCCACTTCTGCAGGTTTGATAAAAGCACGTCCCACATACCCATTTGGAGTGGACCCAGCATGGCATGGTTCAAGAAGTGAATTGCCATTCCTCAATTCATTGAAAATGAAAATGTCAATTCTTCTTGGGGTGGCTCAGATGAACCTTGGAATTATAATAAGCTTTTTCAATGCCAAATTCTTTGGCAATGCCCTGAATGTATGGTTCCAATTTATTCCCGAGATTATATTTCTCAACAGTTTGTTTGGTTACCTATCCCTCCTTATCGTTGTGAAGTGGTGCACTGGTTCAAAAGCTGATTTGTACCATGTAATGATCTACATGTTTCTGAGTCCTACAGATGATTTGGGAGAAAACCAGCTCTTTCCTGGTCAGAAGACTTTGCAGCTTGTACTGTTACTTCTGGCCCTTGTCTCTGTGCCCTGGATGTTGATACCAAAACCTTTTCTTTTGAAGAAGCAACACGATAGGCACCAGGGCGAATCCTATGCACCACTTCAAAGCACAGAGGAGAGCTTGCTAGTGGAGCCAAATCATGATTCCCATGGTCATGAAGAATTTGAGTTCAGTGAAGTCTTTGTCCATCAACTCATACACACCATTGAATTTGTACTTGGAGCAGTGTCTAATACAGCTTCTTACCTTCGTCTTTGGGCCCTTAGCCTTGCGCATTCGGAGTTGTCAACTGTTTTCTATGAAAAGGTTCTTCTTCTTGCATGGGGGTACAACAATGTGATCATTCTTATAGTGGGTTTCATTGTCTTTGTTTTTGCAACTGTGGGGGTGTTACTTGTGATGGAAACCCTCAGCGCCTTCCTCCATGCTCTGCGTCTTCACTGGGTGGAGTTCCAAAATAAGTTCTACGAGGGAGATGGATACTCATTCCATCCTTACTCGTTTGCGTTGCTAGATGATGAAGATGAATGA 2454 0.4271 MGDARRAGCCPPVDLFRSEPMQLVQLIIPMESAHLTVSYLGDLGLLQFKDLNVEKSPFQRTYASQLKRCGEMARKLRYFKEQMFKAGVSPTTLDTDVDENMDDLEVKLAELEAELTEMNANGEKLQRSYNELVEYKLVLQKASEFFHSAQNRALEQQREIESHQSGESMETPLLQDQEMSTDPSKQVKLGFLAGLVPRERSMAFERILFRATRGNVFLRQVIVEDPVTDPVSGEKIEKNVFLVFYAGERAKSKILKICDAFGANRYPFAEESGKQVQMIAEVSARLSELKTTIDTGLLHQGNLLQIIGDQFNQWNLLVRKEKSIYHTLNMLSLDVTKKCLVAEGWSPVFATKQIQDALERAAYDSNSQVGTIFQVLHSRELPPTYFRTNKFTSSFQSIVDAYGVAKYQEANPAVYTIITFPFLFAVMFGDWGHGICLLLATLYLLIREKKYSSQKLGDIMEMTFGGRYVILMMALFSIFTGLIYNEFFSVPFELFGPSAYACRDFSCRDATSAGLIKARPTYPFGVDPAWHGSRSELPFLNSLKMKMSILLGVAQMNLGIIISFFNAKFFGNALNVWFQFIPEIIFLNSLFGYLSLLIVVKWCTGSKADLYHVMIYMFLSPTDDLGENQLFPGQKTLQLVLLLLALVSVPWMLIPKPFLLKKQHDRHQGESYAPLQSTEESLLVEPNHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYNNVIILIVGFIVFVFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYSFHPYSFALLDDEDE 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4887g00058 817 PANTHER VACUOLAR PROTON ATPASES 15 814 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pral4887g00058 817 Coils Coil 94 128 - -
Pral4887g00058 817 Pfam V-type ATPase 116kDa subunit family 39 809 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pral4887g00058 817 PIRSF ATP6V0A1 12 817 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4887g00058 Pral-Chr4887 406730 415604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4887g00058 13 817 Primary Pumps ATPases(2) AT2G21410 77.970 0.0 1309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4887g00058 K02154 - zju:107426698 1333.55