Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4887g00054 ATGGCCAGGCCAAAAGCTCAAAGAAGAACCCTTGATTCTTACACAGTCAAACCCATAAACAAAGCCATTACGGCCGGCGACTGCGTGCTCATGCGGCCGTCCGACCCGTCAAATCCGTCCTATGTGGCTAGGATTGAGCGGATCGAAGCTGACTCGCGTGGCGCCAACGTGAAGGTCCACGTCCGGTGGTATTACCGGCCGGAGGAGTCAATCGGCGGCCGGCGGCAGTTTCACGGTTCTAAGGAGGTTTTCCTTTCTGATCATTTTGATGTTCAGAGTGCCGATACAATCGAAGGCAAGTGTACGGTTCACAGTTTCAAGAGCTACACGAAACTTGACGCTGTCGGAAACGAGGATTTCTTCTGTCGCTTCGAATACAATTCCGCCACCGGTGCTTTCAATCCTGACAGAGTAGCTGTATACTGCAAATGTGAGATGCCCTACAACCCTGATGACCTAATGGTCCAGTGTGAGAGTTGCAGTGATTGA 489 0.5174 MARPKAQRRTLDSYTVKPINKAITAGDCVLMRPSDPSNPSYVARIERIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSADTIEGKCTVHSFKSYTKLDAVGNEDFFCRFEYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSD 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4887g00054 162 ProSiteProfiles BAH domain profile. 21 137 IPR001025 GO:0003682
Pral4887g00054 162 SUPERFAMILY FYVE/PHD zinc finger 131 161 IPR011011 -
Pral4887g00054 162 SMART BAH_4 21 137 IPR001025 GO:0003682
Pral4887g00054 162 Pfam BAH domain 24 136 IPR001025 GO:0003682
Pral4887g00054 162 PANTHER OS08G0421900 PROTEIN 5 162 - -
Pral4887g00054 162 Gene3D - 5 161 IPR043151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4887g00054 Pral-Chr4887 394288 396159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4887g00054 31 139 Core DNA Replication Machinery Family AT4G14700 28.440 1.78e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4887g00054 K25868 - jre:108986983 321.242