Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4887g00053 ATGGCCAGGCCAAAAGCTCAAAGAAGAACCCTTGATTCTTACACAGTCAAACCCATAAACAAAGCCATTACGGCCGGCGACTGCGTGCTCATGCGGCCGTCCGACCCGTCAAATCCGTCCTATGTGGCTAGGATTGAGCGGATCGAAGCTGACTCGCGTGGCGCCAACGTGAAGGTCCACGTCCGGTGGTATTACCGGCCGGAGGAGTCAATCGGCGGCCGGCGGCAGTTTCACGGTTCTAAGGAGGTTTTCCTTTCTGATCATTTTGATGTTCAGAGTGCCGATACAATCGAAGGCAAGTGTACGGTTCACAGTTTCAAGAGCTACACGAAACTTGACGCTGTCGGAAACGAGGATTTCTTCTGTCGCTTCGAATACAATTCCGCCACCGGTGCTTTCAATCCTGACAGAGTAGCTGTATACTGCAAATGTGAGATGCCCTACAACCCTGATGACCTAATGGTCCAGTGTGAGAGTTGCAGTGATTGGTAA 492 0.5163 MARPKAQRRTLDSYTVKPINKAITAGDCVLMRPSDPSNPSYVARIERIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSADTIEGKCTVHSFKSYTKLDAVGNEDFFCRFEYNSATGAFNPDRVAVYCKCEMPYNPDDLMVQCESCSDW 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4887g00053 163 ProSiteProfiles BAH domain profile. 21 137 IPR001025 GO:0003682
Pral4887g00053 163 SMART BAH_4 21 137 IPR001025 GO:0003682
Pral4887g00053 163 Gene3D - 3 135 IPR043151 -
Pral4887g00053 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 136 163 IPR013083 -
Pral4887g00053 163 PANTHER OS08G0421900 PROTEIN 5 163 - -
Pral4887g00053 163 SUPERFAMILY FYVE/PHD zinc finger 131 163 IPR011011 -
Pral4887g00053 163 Pfam BAH domain 24 136 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4887g00053 Pral-Chr4887 394288 396159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4887g00053 31 139 Core DNA Replication Machinery Family AT4G14700 28.440 3.97e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4887g00053 K25868 - jre:108986983 325.479