Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4887g00051 ATGGCTTCACCCACCACCCTCCTCTTCCTTATTCTCTTGGCTTTATCTTCCTCCTTAACCCCGGCTTCCTCACAACCCGCCACCACCTCCTCCAGATTCTCCCCAAAAGACAATATCCTCATTGATTGTGGTGCTGATTCACCGGCCACCCTCCCCGACGGACGAATGTTCAAATCTGATGCAGAATCTCAAACGTACTTGAATGCCAGTGATGAGTATAAAGCCAACGATGGTCAAGCTAGCGTTTCTTCCCCTATTTATTCTAATTGCAGAATCTTCAAGCAGGAAGCTAAGTACTCTTTCCATTTGAGCGAACCTGGTTTTCATTGGGTTCGTCTTCATTTCTACCCTGTCAAAACTGATGTTTTTGATCTCCAGAAGGCCACTTTCTCTGTTAAGACAGAAAAATTTGTTCTGCTTCATAGTTTTAACTTCAACAACAGCGAAAATCCTATTGTTAAAGAGTACCTCATCAATGCAACCGACAGTCTCATGTCCTTAACCTTCACGCCCCTCAAGAATTCAGCTGCTTTCATCAATGCCATCGAAGTTGTTTCAGCCCCGGACAGTTTGATTTCCGACACAGGATCGGCTCTCTTCGCTGTTGGTGAATTCTCAGGCCTCACAAACTACGCCTTCCAAGCTGTTTACAGAGTCAACAATGGAGGCCCTCTAATCACATCGGCGAACGACAGTCTGGGAAGAACATGGGTCCCAGATGAGAGTTTTCTCAAGAACAAGGACGTGGCGAAAAGTGTTTCGGTAGCCCCGAACGTCATTAAATTCCCCGAAAACCAACCCACCATGTCTCCTTTAATAGCCCCACAAACCGTATACTCATCAGCAACAGAAATGGCCGACGCACAAGTGAACCAAGCCAATTTCAACGTGTCGTGGAAATTCGACGTGGATACTGCTTTCAGTTACCTCATAAGACTCCATTTCTGCGACATCGTAAGCAAAAGTCTCAACCAGCTCTACTTCAATGTATACGTAAACCAGAAGATGGCGATTGCTAGCCTCGATTTGTCCTCCCTAACCGGAGCATTAACGACGCCGTTTTACAAAGACATTGTGGTGAACGCGTCGCTGATGGGGCAGGGGCTATCGATTCAGGTGGGTCCGGCACAACCAGATAGCGGCGACATGAATGCCATAGTGAATGGAATCGAAGTGATGAAGATGAGCAATACGGTGAACAGCTTGGACGGAGAATTCGGGGTGGACGGTCAGAGCAGCGGCGGTTCGAACCGGGGCACGGTGGCGGCGGTTGGATTCGCAATGATGTTCGGAGCGTTTGTGGGGCTGGGGGCGATGGTGGTGAAGTGGCACAAGAGACCCCAAGATTGGCAAAGGAGAAACAGCTTCTCTTCATGGTTGCTTCCTCTTCATGCAGGTGACAATAGCTTCACGAAAAGCTCCATGGGCTCACACAAAAGCATTTTCAGCTCTTCCACAACGGGCTTGGGACGATACTTCTCATTCGCAGAGCTGCAAGAAGCAACCAAGAACTGGGACTCAACCATTATCGGAGTTGGTGGCTTCGGTAATGTCTACCTAGGAATCATCGACGAAGGAACAAATGTTGCCGTAAAAAGAGGAAACCCACAATCCGAACAGGGAATCAACGAGTTCCAAACAGAGATTCAAATGCTCTCCAAGCTAAGACACAGGCACTTGGTTTCTCTCATCGGATATTGCGACGAGAACGACGAGATGATCTTGGTCTATGAGTACATGTCCAACGGGCCTTTCAGAGACCATCTCTACGGCAAGAATCGGCCTCCTCTTTCATGGAAACAAAGACTCGAAATCTGCATCGGCTCGGCCCGCGGGCTTCACTATCTGCACACCGGAACCGCCCAAGGTATCATCCACCGCGACGTCAAGACCACCAACATCCTCCTCGACGATAACTTCACGGCCAAGGTATCTGATTTTGGGCTCTCCAAGGACGCACCAATGGGGCAAGGCTACGTCAGCACGGCGGTGAAGGGTAGTTTTGGGTATTTAGACCCGGAGTACTTCAGGAGGCAGCAATTAACAGATAAATCAGATGTTTATTCTTTTGGGGTAGTTTTGTTGGAGACACTGTGTGCTAGGGCCCCCTTGTGCCCTCAATTACCCAGAGAACAAGTGAACTTGGCGGACTGGGCGATGCAGTGGAAGAGGAAAGGGTTGCTTGATAAGATCATAGACCCTGCTCTTGTGGGAACAATCTGCCCCGAATCGATGAACAAGTTTGCAGAAGCAGCTGAGAAATGTTTAGCAGATTATGGAGCTGATAGGCCATCAATGGGGGATGTGTTGTGGAACCTGGAATATGCATTGCAGCTTCAAGAAGCTTACGTGCAGGGAAAATCCGACGATGTCCCTGATCCTATGCCTTCACCGGCGTCCACTGCAACACCGGCGGCGAATTCTTCTCTTCCTCCCGCTGCCCCAACGACAACCTCGGAACAACCACCTAGTACCACTCCTACTCCTCAATATATCACCGACCTGCCAGAAAACAAACCCATTGATGATCATTCTGGAACAGCCGTGTTTGCCCAGTTCGCTAACAACCTCAGCGGCAGGTAA 2583 0.4921 MASPTTLLFLILLALSSSLTPASSQPATTSSRFSPKDNILIDCGADSPATLPDGRMFKSDAESQTYLNASDEYKANDGQASVSSPIYSNCRIFKQEAKYSFHLSEPGFHWVRLHFYPVKTDVFDLQKATFSVKTEKFVLLHSFNFNNSENPIVKEYLINATDSLMSLTFTPLKNSAAFINAIEVVSAPDSLISDTGSALFAVGEFSGLTNYAFQAVYRVNNGGPLITSANDSLGRTWVPDESFLKNKDVAKSVSVAPNVIKFPENQPTMSPLIAPQTVYSSATEMADAQVNQANFNVSWKFDVDTAFSYLIRLHFCDIVSKSLNQLYFNVYVNQKMAIASLDLSSLTGALTTPFYKDIVVNASLMGQGLSIQVGPAQPDSGDMNAIVNGIEVMKMSNTVNSLDGEFGVDGQSSGGSNRGTVAAVGFAMMFGAFVGLGAMVVKWHKRPQDWQRRNSFSSWLLPLHAGDNSFTKSSMGSHKSIFSSSTTGLGRYFSFAELQEATKNWDSKXIIGVGGFGNVYLGIIDEGTNVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENDEMILVYEYMSNGPFRDHLYGKNRPPLSWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKTTNILLDDNFTAKVSDFGLSKDAPMGQGYVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLETLCARAPLCPQLPREQVNLADWAMQWKRKGLLDKIIDPALVGTICPESMNKFAEAAEKCLADYGADRPSMGDVLWNLEYALQLQEAYVQGKSDDVPDPMPSPASTATPAANSSLPPAAPTTTSEQPPSTTPTPQYITDLPENKPIDDHSGTAVFAQFANNLSGR 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4887g00051 861 Gene3D - 212 397 - -
Pral4887g00051 861 Gene3D - 38 188 - -
Pral4887g00051 861 PANTHER OS07G0166700 PROTEIN 491 781 IPR045272 GO:0004714|GO:0006468
Pral4887g00051 861 SMART serkin_6 505 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4887g00051 861 MobiDBLite consensus disorder prediction 787 848 - -
Pral4887g00051 861 Pfam Malectin-like domain 41 395 IPR024788 -
Pral4887g00051 861 FunFam Receptor-like protein kinase FERONIA 212 397 - -
Pral4887g00051 861 FunFam Receptor-like protein kinase FERONIA 581 792 - -
Pral4887g00051 861 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Pral4887g00051 861 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Pral4887g00051 861 Pfam Protein tyrosine and serine/threonine kinase 509 712 IPR001245 GO:0004672|GO:0006468
Pral4887g00051 861 SUPERFAMILY Protein kinase-like (PK-like) 479 775 IPR011009 -
Pral4887g00051 861 Gene3D Transferase(Phosphotransferase) domain 1 581 794 - -
Pral4887g00051 861 ProSiteProfiles Protein kinase domain profile. 505 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4887g00051 861 CDD STKc_IRAK 511 775 - -
Pral4887g00051 861 FunFam receptor-like protein kinase FERONIA 468 580 - -
Pral4887g00051 861 MobiDBLite consensus disorder prediction 801 834 - -
Pral4887g00051 861 FunFam Putative receptor-like protein kinase 38 188 - -
Pral4887g00051 861 Gene3D Phosphorylase Kinase; domain 1 467 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4887g00051 Pral-Chr4887 373827 376652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4887g00051 33 861 Receptor kinase-like Gene Family AT4G39110 67.066 0.0 1170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral4887g00051 Malectin_like 1.4e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4887g00051 - - gmx:100793784 1261.9