Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4887g00031 ATGGCTCCCAAGAAGGACAAGGGTCCTGCTCCTTCCTCGAAACCTGCCAAGTCTGGCGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAGAAGGAGAAGGTAAATAACATGGTGCTCTTCGATCAGGGCACCTATGACAAGCTCTTGTCTGAGGCACCAAAATACAAGCTCATCACACCTTCCATTCTCTCTGATCGTTTGAGGATCAATGGATCACTAGCAAGGAAGGCCATTAGAGAATTGATGGCTAGAGGCTCAATCAGGATGGTATCTGCACACGCAAGTCAGCAGATCTACACTAGGGCTACAAACACTTAA 327 0.4832 MAPKKDKGPAPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGSIRMVSAHASQQIYTRATNT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4887g00031 108 Pfam S25 ribosomal protein 11 105 IPR004977 -
Pral4887g00031 108 Gene3D - 21 108 - -
Pral4887g00031 108 MobiDBLite consensus disorder prediction 1 36 - -
Pral4887g00031 108 PANTHER 40S RIBOSOMAL PROTEIN S25 1 108 IPR004977 -
Pral4887g00031 108 FunFam 40S ribosomal protein S25 21 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4887g00031 Pral-Chr4887 228428 230294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4887g00031 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 91.589 2.45e-54 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4887g00031 K02975 - gmx:100499810 162.155