Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4887g00013 ATGGCTTCTGCAGATGTTGAGTATCGTTGCTTTGTCGGTGGGCTCGCATGGGCTACCGACAACGATGCCCTTGGCCAGGCCTTTGCTCCTTTCGGCGATGTTATTGAATCGAAGATTATCAACGATCGCGAGACCGGAAGGTCCAGAGGGTTCGGATTCGTGACGTTCTCCTCAGAGCAGTCCATGAGGGATGCGATCGAAGGCATGAACGGTCAGAGCCTTGATGGTCGGAACATTACGGTGAACGAAGCTCAGTCTCGTGGAAGAGGCGGCGGCGGCGGCGGCGGCGGATACGGCGGTGGGAGTGGGTATAGCCGCGGTGGAGGCGGATACGGAGGCGGCGGGTACGGAGGCGGCGGACGCCGCGAGGGTGGATACTACAAGAGTGGTGGAGGATACGGCGGCGGCGGCGGTTATGGTGATCGTGGCTCTCGCTACTCTCGTGGGGGTGGTGAGTCCTATGGAAACTGGAGGGATTAA 480 0.6 MASADVEYRCFVGGLAWATDNDALGQAFAPFGDVIESKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGQSLDGRNITVNEAQSRGRGGGGGGGGYGGGSGYSRGGGGYGGGGYGGGGRREGGYYKSGGGYGGGGGYGDRGSRYSRGGGESYGNWRD 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4887g00013 159 MobiDBLite consensus disorder prediction 69 85 - -
Pral4887g00013 159 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Pral4887g00013 159 MobiDBLite consensus disorder prediction 69 104 - -
Pral4887g00013 159 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Pral4887g00013 159 SUPERFAMILY RNA-binding domain, RBD 8 118 IPR035979 GO:0003676
Pral4887g00013 159 Gene3D - 2 105 IPR012677 -
Pral4887g00013 159 PANTHER GEO13361P1-RELATED 3 151 - -
Pral4887g00013 159 SMART rrm1_1 9 82 IPR000504 GO:0003723
Pral4887g00013 159 CDD RRM2_NsCP33_like 9 84 - -
Pral4887g00013 159 MobiDBLite consensus disorder prediction 130 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4887g00013 Pral-Chr4887 109182 110228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4887g00013 10 88 Eukaryotic Initiation Factors Gene Family AT2G23350 31.646 9.29e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4887g00013 - K13195 fve:101299909 157.918