Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4887g00011 ATGTCAACCATCTCCGACCATTCCTCCACCAACTTTGTTCTGCATGAACTGAACAAGACCACTCCTTTTCTGGGTTTACAACTTTACATCGTTATTTGTGTTTTTCTCTTCATCTTCGTCTTTCTGGTGCTTCTGATCTTCCTCTGCATTCGCCGGGATCGAAGCTCCACCAAACCCAGTACGCTAGCCAGCCAAAGCTCCGGCGTGATTCCGTTGGTGTCGAAGGAGATCGTGGAGGTCGAAGCCTTGGATCTTCTTGGTATTGAAGAAGAGAAAAAGCTCAAGCCAGGTCGTGATCTAAGGAGGAAGCAGGCGGAAGACGAGGAGATCAATGTTGGATTTCGGAGAGGGAAACAGAGGAACGATGAGACTGATGCCGTGGACGGCCTGAAGATGGGGTGGGGCCGTTGGTACAGCTTAGAGGAGCTTAACCTTGCGACACGTGGATTTTCCGACGAGAATGTGATCGGAGAAGGAGGCTATGGAATTGTGTACAGAGGAGTTCTACAAGATGGCTCTGTTGTTGCTGTGAAGAAACTTCTAAACAACAAGGGTCAAGCTGAGAAGGAGTTTAAGGTGGAGGTTGAAGCTATTGGAAAAGTAAAGCATAAGAATTTGGTGGGTTTAATAGGATATTGTGCAGAAGGTGCTCAAAGGATTCTTGTTTATGAATATGTTGAGAATGGAACCTTGGAGCAGTGGTTGCATGGTGAGGTAGGGCCTACCAGCCCATTAACATGGGATATACGTATGAGGATCGCCATAGGGACGGCAAAAGGGCTTGCCTATTTGCATGAGGGGTTAGAACCCAAAGTTGTGCACCGAGATGTGAAATCTAGTAACATTCTTCTGGATAAAAGATGGAATGCCAAGGTATCAGACTTTGGACTGGCCAAACTCTTGGGATCCGAGAAAAGCTACGTGTCTACACGCGTAATGGGGACATTTGGATATGTTTCGCCCGAGTATGCGAGCACGGGTATGCTTAATGAAGGTAATGATGTGTATAGTTTTGGAGTTCTGCTGATGGAGATAATCACCGGAAGAAGTCCCATTGATTATTCTAGATCGCCAGCTGAGATGAACTTGGTCGACTGGTTCAAGGGAATGGTGGCGAGTCGTCGTGGCGATGAGCTAGTAGATCCTTCGATTGAGATTAAGCCCCCTCCGAGATCACTGAAGCGAGCTTTGCTGGTTTGTCTGCGCTGCATAGATATGGATGTCTGTAAGCGGCCAAAGATGAGTCAAATAGTTCATATGCTTGAGGCAGATGATTTTCCCTTCCGTTCTGAACTTCGGACTGCTAGGGAGAGAGATCCTATGGCTTCTCATGCAGGTGTTTGCAGCAAAATTTCATATCCACTAAAGCATGGAGTGGAAGCGGTTGAGAGATCAAGATGGCGATGA 1407 0.4705 MSTISDHSSTNFVLHELNKTTPFLGLQLYIVICVFLFIFVFLVLLIFLCIRRDRSSTKPSTLASQSSGVIPLVSKEIVEVEALDLLGIEEEKKLKPGRDLRRKQAEDEEINVGFRRGKQRNDETDAVDGLKMGWGRWYSLEELNLATRGFSDENVIGEGGYGIVYRGVLQDGSVVAVKKLLNNKGQAEKEFKVEVEAIGKVKHKNLVGLIGYCAEGAQRILVYEYVENGTLEQWLHGEVGPTSPLTWDIRMRIAIGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKRWNAKVSDFGLAKLLGSEKSYVSTRVMGTFGYVSPEYASTGMLNEGNDVYSFGVLLMEIITGRSPIDYSRSPAEMNLVDWFKGMVASRRGDELVDPSIEIKPPPRSLKRALLVCLRCIDMDVCKRPKMSQIVHMLEADDFPFRSELRTARERDPMASHAGVCSKISYPLKHGVEAVERSRWR 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4887g00011 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Pral4887g00011 468 ProSiteProfiles Protein kinase domain profile. 150 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4887g00011 468 SMART serkin_6 150 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4887g00011 468 Pfam Protein kinase domain 151 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4887g00011 468 CDD STKc_IRAK 156 422 - -
Pral4887g00011 468 ProSitePatterns Protein kinases ATP-binding region signature. 156 179 IPR017441 GO:0005524
Pral4887g00011 468 SUPERFAMILY Protein kinase-like (PK-like) 135 427 IPR011009 -
Pral4887g00011 468 Gene3D Phosphorylase Kinase; domain 1 115 225 - -
Pral4887g00011 468 Gene3D Transferase(Phosphotransferase) domain 1 226 433 - -
Pral4887g00011 468 FunFam Probable serine/threonine-protein kinase At1g01540 130 225 - -
Pral4887g00011 468 PANTHER OS01G0323000 PROTEIN 10 439 - -
Pral4887g00011 468 FunFam Putative receptor-like serine/threonine-protein kinase 226 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4887g00011 Pral-Chr4887 72462 75676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4887g00011 108 424 Trihelix Transcription Factor Family AT1G70460 47.706 2.93e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pral4887g00011 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4887g00011 - - gmx:100779420 642.114