Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4886g00064 ATGGACGGCGATGAACCTCCTTGTCCATCACCGCATGTTTCGTCATCTTCGATCTTCAAGGACATATCCAATTTCAAAACTCCGAAACGTCCCTCTTACAACCTCAACTTCCAATCCCCTTGTCAGAAGTTCTTCACTGCCTCCAAGCAAACGCCGCACTCGTCAGCGTTCCGTCGCCGGCCGTCTGTCGCTCCACCATCTTCAGCTCGAACAAAGAAGTCCGCCGCGGCAGCCAGGAAACTCAAGGCATTTGAACTTGAGCAGTCTCAATCCTCGAGAAAAGCTCAAATCAAGAAAGAACAGTCTCTTAAATCTTTAGCCAAGTCTATCACTGTTTGGCTTAATTTTTTGTTCGAAAACCCTGCTACGTGCGGATGTAACTTGTCCATCGGCGGTATTCGGATGGGGGATAAGCATTCTGAAGCGGAGGCTACGAAGGGCAAGAGGGATAGCGGTCCTGGGATTTCCATTGGGGTCGATAAAGCCTGGCGTACTCCGAAGAGGCAGAGGAAGATTTGGTCGCGGGCAGAGGACAATGTTGGTAATGAAAATACGCCCTTGGAGTTGCCAAATTCTATGTTTTCGCACTTGAGGGAATCTCTGGAGGATGTCTGCAGTTTCGATGATTTGAAGCAGCGAATGAGAATTTATCTGAACTTGGGAAGTTGTAAAGAAATTTTTGAAGTTATGAATCAAGTCACCAAGAATATCGATGAAGGCAGGTTAAAGTTGAAGCCACATTGCCCCATAGTGACAGATCTCGGATTGAAAAATAAAGCCACAAGAATTCTAATGTCTTATAATCCCATTTGGCTCCGGATTGGATTATATATAATTTTTGGTGGTGACTCCTTGGTGCCTAACGGGGATGATGATTCCGAACAAGAAATCACGTTTTTGAAAATGGTTATTGACAAGCAATTTTTTTCACATGCGGGTTTGGCAAAAGCATATGCTTATAACAAGATGGTTGACGGCCTATACAGGCCAGGGTACTATGAGAATTTGGGGAATGTGATTTTAAAGAGAATATTATTGATTGTGCTTACTCTGGATAGAATTAAATCTCAGAGCTGCCTTTCACTTAAGTATGGTATCGATGGATTGGATGGGGGTTCCCCTTTGTTGTTTAAAGCAGATTCTTGGATTAAATCAAGTGGTCAGGTCATCAGTGAATTCCTATCGTCAGAGGTAATGCACGGAGAAGGAAATCTTCTGGCTCATTTAGTAATAATAGGTTACAAAGTATCTCATCAACAGGGGCCACTGGTCGAGTATGATTTCAAGGTCAGAGATTTATTTGTAGATCTCCAAGATGGATTAAAGCTCTGTAGAGCTATACAGCTTTTGCAGCATGATTCTTCCATCCTCACGAAAATCGTAGTTCCCTCAGACACTTATAAGAAGAACTTGGCCAACTGTGGCCTTGCGCTACAATACCTTAAGAAAGCTGGTGTTTTGCTACACGATGAGGATAACATGATGATTGAAGCAGAGGACGTTGCCAATGGAGACAAAGAACTTGTTCTCTCGTTGCTGTGGAATATCTTTGTTCATTTGCAGCTACCTCTTCTGGTTGATAAATCATGTTTACTAGAGGAAATTGGTAAAATTCGAGGACTTGGTGTGAATGCCATTAACAATGCAAATTCAAGTTCATTGGAATTGCTTTTGAATTGGATTCAGGCAGTTTGTGCAAATTATGATTGTGGGGTTGACAATTTTGATTCATTAGTTGATGGAAAAGCTATCTGGTGCTTACTTGATTATTATTTCCAGAAAGAATTTCATAGTTCCTGTTTAATGAAGGAAGTCGATCCAAAGAGTGGCAAGGAATCAATAATGTCTGTCAACGATTATTCAGATGCAGTGTACAATTTTATATTATCACAGAGGTTGACAACATTATTAGGAAATTTTCCGGAGGTACTTCAAATAAGCGACCTACTCGAATATAACGGCGCTTCCAGTGATCGAAGTGTAGTGATATTGTTGGTTTTCCTTGCAAGGCAATTATTTGTCAAGAAAAATGTGGATCAATTAAATTTCCATAAGCTCCTTGGTTGTGATTGCCAAAGTCTGTACCGGAAACATTTGAGGATGGAGCAGTGTCTTTCTAATACTGGAGCAGCACACAAGCCGGACGCTTCTGATGTGCATGACAACGAAGATGCTGCAAAAAAATTCAAGGCCATCCAGGCTTGGTGGCAACTCATGGCTGAAAGAAATCAGAAATCTTATATGAAACCGGCTGCGTGTAGACCCATTGAAAGCAGCGCCAACGTCAGAAAAGAAACCGCTGCAATAACAATACAATCACGTTTCAGAAGATTGGTTGCTCGTCGCACGTTTCTTAAAATGCATAATGCTGTCTCTCTTTTGCAAACTGTTTTCCGAGCTTGGCTAGAAGTGAGGCAGGAGTCATCGTTCTCCTTCGTCCAAGCGATACACAAGAGACCAGAAACACATAGGAGAGATGCCATGTTTTTCGTTCAAAGGCACTCTTTCTTGAAGCTAAAGAGGTCCGCATTGCTTATCCAGCAAGCAGTGCGGAGTTGGCTCTCTTGGAGGCATCAGCAGGAATGCAGTATACTTCCTCAATTGACGGCTTCAGATCCAGTGGCTGCTGCCACTACTGTTCAGAAATTTGTTCGTGGTTGGATGGCACGATCTAGATATAATCACATGCTTGAGCAGCAAGAGAAAGCTTCGTATTTGTACTCACAAAAGGTTATGTTTGAACTTCAAACGAAAGCGGCCATCAGGATTCAGCTTGCTTGGAAGAGGTATATGTGCTGCAAGTTTACTCAGAGGCACTTCTGTGCGACAATAATTCAAAGCAGCTTTCGTAGGTGGCGGTTAAGAAGAATATATTTGAATCAGATTCAAGCTGTTCTGAAAATCCAATGTTATTTTCGAATGTCTGCTAGTGTAAAGACTTTTCAACACTTCAAAATGGCATTTAAGGCAGCCATTGTCATTCAATCGTTCACACGTGCATGGATTGCACGGAAGGAAGCTTATGCACGTAGAAGTCGCATCGTTTCAATTCAAAGGCATTGCCGCGCTTGGCTGGCGAGAAGGGACTTCATGTGCCAAAGAGGCGCTGCAATGAAGATCCAGACCGTCATTCTTAGTCTGAAGTACCAGAAGGCTCTCAATTGTCGGAAAGATGCAGTGCTGCAGATTCAGCGTTTTATTAGGGGGCATTTATCACGAAATAGACTCTTGGGGGGTGCATCTCGTCAACGCGCAATGGTTCCAAGTGGTTGCATTTTAAGATCAGCTGGTTACTCTAGTTTTCAACTGGAACTATATCTGTGTTCTGTTCTGAAATTGCAGCGGTGGTGGAGGGGTGTCTTGCTACACAAGTTAAGAACAAAGTCTGTAGTTATAATCCAATCGTGTACTCGGGGGTGGATTGCTAGGCGAATGGCAACTGTTCGCAGACACCATGTTATTGTCATTCAATCCCACTGGAAAGGTTACCTTGCTCGGAAGGAGTCAAGAGAGCAGCTGCGAGACTTGCGCTTGAGGGTAAAGAAGTCTGCCAGAAATGTGGACGATAGCAAGCGTCTCATAAACAGACTTCTCCTGGCGCTTTCAGAGCTGCTTCATATGAAGAGTGTCAGTGGCATCCTTCATACTTGTGCAACGTTGGACATGGCTACGGAACATTCCCAGAAATGTTGTGAAGAACTTGTCGCCGCAGGGGCTATTGACAAGTTGCTGACGCTTATTCGCTCAGTAAGCCGAAGTATACCTGATCAGGAGGTTCTTAAGCATGCTCTGTCAACTCTCCGAAATCTAGCCCGCTACCCTCACCTACTTGAATTGCTGATCCAAAGCAACGGTTCCATGCAGACAATCCTCTGGGAATTACTGAGGAATAAGGAGGACAGTTACTTTATTGCTTCGGAACTTTTGATGAAGATATCTTCAACTCCTAAAGGTGTTGAATCGTTACGCAAGTTACCTGCTCTTGTAAAACGACTGCATGCTCTTGTTGAGGAGCTTACACGGAAGGGAATCTACGAGAAAAGAAATGGCAGAGCTCCTAGTGCAGTAATAAGAGAGAATAGAGAGAGGAGATTGAAGGAGGCTGCTGGGATTCTCAAACTGATAACAAATGCCTAA 4137 0.4339 MDGDEPPCPSPHVSSSSIFKDISNFKTPKRPSYNLNFQSPCQKFFTASKQTPHSSAFRRRPSVAPPSSARTKKSAAAARKLKAFELEQSQSSRKAQIKKEQSLKSLAKSITVWLNFLFENPATCGCNLSIGGIRMGDKHSEAEATKGKRDSGPGISIGVDKAWRTPKRQRKIWSRAEDNVGNENTPLELPNSMFSHLRESLEDVCSFDDLKQRMRIYLNLGSCKEIFEVMNQVTKNIDEGRLKLKPHCPIVTDLGLKNKATRILMSYNPIWLRIGLYIIFGGDSLVPNGDDDSEQEITFLKMVIDKQFFSHAGLAKAYAYNKMVDGLYRPGYYENLGNVILKRILLIVLTLDRIKSQSCLSLKYGIDGLDGGSPLLFKADSWIKSSGQVISEFLSSEVMHGEGNLLAHLVIIGYKVSHQQGPLVEYDFKVRDLFVDLQDGLKLCRAIQLLQHDSSILTKIVVPSDTYKKNLANCGLALQYLKKAGVLLHDEDNMMIEAEDVANGDKELVLSLLWNIFVHLQLPLLVDKSCLLEEIGKIRGLGVNAINNANSSSLELLLNWIQAVCANYDCGVDNFDSLVDGKAIWCLLDYYFQKEFHSSCLMKEVDPKSGKESIMSVNDYSDAVYNFILSQRLTTLLGNFPEVLQISDLLEYNGASSDRSVVILLVFLARQLFVKKNVDQLNFHKLLGCDCQSLYRKHLRMEQCLSNTGAAHKPDASDVHDNEDAAKKFKAIQAWWQLMAERNQKSYMKPAACRPIESSANVRKETAAITIQSRFRRLVARRTFLKMHNAVSLLQTVFRAWLEVRQESSFSFVQAIHKRPETHRRDAMFFVQRHSFLKLKRSALLIQQAVRSWLSWRHQQECSILPQLTASDPVAAATTVQKFVRGWMARSRYNHMLEQQEKASYLYSQKVMFELQTKAAIRIQLAWKRYMCCKFTQRHFCATIIQSSFRRWRLRRIYLNQIQAVLKIQCYFRMSASVKTFQHFKMAFKAAIVIQSFTRAWIARKEAYARRSRIVSIQRHCRAWLARRDFMCQRGAAMKIQTVILSLKYQKALNCRKDAVLQIQRFIRGHLSRNRLLGGASRQRAMVPSGCILRSAGYSSFQLELYLCSVLKLQRWWRGVLLHKLRTKSVVIIQSCTRGWIARRMATVRRHHVIVIQSHWKGYLARKESREQLRDLRLRVKKSARNVDDSKRLINRLLLALSELLHMKSVSGILHTCATLDMATEHSQKCCEELVAAGAIDKLLTLIRSVSRSIPDQEVLKHALSTLRNLARYPHLLELLIQSNGSMQTILWELLRNKEDSYFIASELLMKISSTPKGVESLRKLPALVKRLHALVEELTRKGIYEKRNGRAPSAVIRENRERRLKEAAGILKLITNA 1378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4886g00064 1378 ProSiteProfiles IQ motif profile. 1056 1085 IPR000048 GO:0005515
Pral4886g00064 1378 ProSiteProfiles IQ motif profile. 875 902 IPR000048 GO:0005515
Pral4886g00064 1378 Coils Coil 1166 1186 - -
Pral4886g00064 1378 ProSiteProfiles IQ motif profile. 989 1016 IPR000048 GO:0005515
Pral4886g00064 1378 Pfam Armadillo/beta-catenin-like repeat 1227 1272 IPR000225 GO:0005515
Pral4886g00064 1378 SUPERFAMILY ARM repeat 1195 1337 IPR016024 -
Pral4886g00064 1378 Gene3D - 988 1034 - -
Pral4886g00064 1378 Gene3D - 763 811 - -
Pral4886g00064 1378 Gene3D - 1123 1177 - -
Pral4886g00064 1378 Gene3D - 874 938 - -
Pral4886g00064 1378 Gene3D - 939 987 - -
Pral4886g00064 1378 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1109 1172 IPR027417 -
Pral4886g00064 1378 ProSiteProfiles IQ motif profile. 1149 1177 IPR000048 GO:0005515
Pral4886g00064 1378 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1238 1285 IPR000225 GO:0005515
Pral4886g00064 1378 Gene3D - 415 521 IPR036872 -
Pral4886g00064 1378 ProSiteProfiles IQ motif profile. 1010 1039 IPR000048 GO:0005515
Pral4886g00064 1378 SMART arm_5 1227 1272 IPR000225 GO:0005515
Pral4886g00064 1378 ProSiteProfiles IQ motif profile. 1126 1153 IPR000048 GO:0005515
Pral4886g00064 1378 Pfam IQ calmodulin-binding motif 1058 1076 IPR000048 GO:0005515
Pral4886g00064 1378 Pfam IQ calmodulin-binding motif 941 958 IPR000048 GO:0005515
Pral4886g00064 1378 Pfam IQ calmodulin-binding motif 767 784 IPR000048 GO:0005515
Pral4886g00064 1378 Pfam IQ calmodulin-binding motif 1013 1030 IPR000048 GO:0005515
Pral4886g00064 1378 Pfam IQ calmodulin-binding motif 1127 1144 IPR000048 GO:0005515
Pral4886g00064 1378 Pfam IQ calmodulin-binding motif 1109 1124 IPR000048 GO:0005515
Pral4886g00064 1378 Pfam IQ calmodulin-binding motif 989 1006 IPR000048 GO:0005515
Pral4886g00064 1378 Pfam IQ calmodulin-binding motif 1153 1168 IPR000048 GO:0005515
Pral4886g00064 1378 Pfam IQ calmodulin-binding motif 875 893 IPR000048 GO:0005515
Pral4886g00064 1378 ProSiteProfiles IQ motif profile. 764 792 IPR000048 GO:0005515
Pral4886g00064 1378 CDD CH_ASPM_rpt1 405 516 - -
Pral4886g00064 1378 SUPERFAMILY Calponin-homology domain, CH-domain 322 603 IPR036872 -
Pral4886g00064 1378 MobiDBLite consensus disorder prediction 10 25 - -
Pral4886g00064 1378 PANTHER UNCHARACTERIZED 39 860 - -
Pral4886g00064 1378 Gene3D - 1180 1377 IPR011989 -
Pral4886g00064 1378 Gene3D - 548 674 IPR036872 -
Pral4886g00064 1378 ProSiteProfiles Calponin homology (CH) domain profile. 399 521 IPR001715 GO:0005515
Pral4886g00064 1378 MobiDBLite consensus disorder prediction 48 74 - -
Pral4886g00064 1378 MobiDBLite consensus disorder prediction 1 25 - -
Pral4886g00064 1378 SMART iq_5 838 860 IPR000048 GO:0005515
Pral4886g00064 1378 SMART iq_5 1055 1077 IPR000048 GO:0005515
Pral4886g00064 1378 SMART iq_5 1148 1170 IPR000048 GO:0005515
Pral4886g00064 1378 SMART iq_5 960 982 IPR000048 GO:0005515
Pral4886g00064 1378 SMART iq_5 1125 1147 IPR000048 GO:0005515
Pral4886g00064 1378 SMART iq_5 786 808 IPR000048 GO:0005515
Pral4886g00064 1378 SMART iq_5 986 1008 IPR000048 GO:0005515
Pral4886g00064 1378 SMART iq_5 937 959 IPR000048 GO:0005515
Pral4886g00064 1378 SMART iq_5 1009 1031 IPR000048 GO:0005515
Pral4886g00064 1378 SMART iq_5 872 894 IPR000048 GO:0005515
Pral4886g00064 1378 SMART iq_5 915 936 IPR000048 GO:0005515
Pral4886g00064 1378 SMART iq_5 763 785 IPR000048 GO:0005515
Pral4886g00064 1378 Pfam Calponin homology (CH) domain 429 520 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4886g00064 Pral-Chr4886 411243 421310 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4886g00064 1004 1184 Myosins gene family AT5G43900 28.042 3.65e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4886g00064 K16743 - jre:108981478 1604.34