Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4886g00063 ATGGACGGCGATGAACCTCCTTGTCCATCACCGCATGTTTCGTCATCTTCGATCTTCAAGGACATATCCAATTTCAAAACTCCGAAACGTCCCTCTTACAACCTCAACTTCCAATCCCCTTGTCAGAAGTTCTTCACTGCCTCCAAGCAAACGCCGCACTCGTCAGCGTTCCGTCGCCGGCCGTCTGTCGCTCCACCATCTTCAGCTCGAACAAAGAAGTCCGCCGCGGCAGCCAGGAAACTCAAGGCATTTGAACTTGAGCAGTCTCAATCCTCGAGAAAAGCTCAAATCAAGAAAGAACAGTCTCTTAAATCTTTAGCCAAGTCTATCACTGTTTGGCTTAATTTTTTGTTCGAAAACCCTGCTACGTGCGGATGTAACTTGTCCATCGGCGGTATTCGGATGGGGGATAAGCATTCTGAAGCGGAGGCTACGAAGGGCAAGAGGGATAGCGGTCCTGGGATTTCCATTGGGGTCGATAAAGCCTGGCGTACTCCGAAGAGGCAGAGGAAGATTTGGTCGCGGGCAGAGGACAATGTTGGTAATGAAAATACGCCCTTGGAGTTGCCAAATTCTATGTTTTCGCACTTGAGGGAATCTCTGGAGGATGTCTGCAGTTTCGATGATTTGAAGCAGCGAATGAGAATTTATCTGAACTTGGGAAGTTGTAAAGAAATTTTTGAAGTTATGAATCAAGTCACCAAGAATATCGATGAAGGCAGGTTAAAGTTGAAGCCACATTGCCCCATAGTGACAGATCTCGGATTGAAAAATAAAGCCACAAGAATTCTAATGTCTTATAATCCCATTTGGCTCCGGATTGGATTATATATAATTTTTGGTGGTGACTCCTTGGTGCCTAACGGGGATGATGATTCCGAACAAGAAATCACGTTTTTGAAAATGGTTATTGACAAGCAATTTTTTTCACATGCGGGTTTGGCAAAAGCATATGCTTATAACAAGATGGTTGACGGCCTATACAGGCCAGGGTACTATGAGAATTTGGGGAATGTGATTTTAAAGAGAATATTATTGATTGTGCTTACTCTGGATAGAATTAAATCTCAGAGCTGCCTTTCACTTAAGTATGGTATCGATGGATTGGATGGGGGTTCCCCTTTGTTGTTTAAAGCAGATTCTTGGATTAAATCAAGTGGTCAGGTCATCAGTGAATTCCTATCGTCAGAGGTAATGCACGGAGAAGGAAATCTTCTGGCTCATTTAGTAATAATAGGTTACAAAGTATCTCATCAACAGGGGCCACTGGTCGAGTATGATTTCAAGGTCAGAGATTTATTTGTAGATCTCCAAGATGGATTAAAGCTCTGTAGAGCTATACAGCTTTTGCAGCATGATTCTTCCATCCTCACGAAAATCGTAGTTCCCTCAGACACTTATAAGAAGAACTTGGCCAACTGTGGCCTTGCGCTACAATACCTTAAGAAAGCTGGTGTTTTGCTACACGATGAGGATAACATGATGATTGAAGCAGAGGACGTTGCCAATGGAGACAAAGAACTTGTTCTCTCGTTGCTGTGGAATATCTTTGTTCATTTGCAGCTACCTCTTCTGGTTGATAAATCATGTTTACTAGAGGAAATTGGTAAAATTCGAGGACTTGGTGTGAATGCCATTAACAATGCAAATTCAAGTTCATTGGAATTGCTTTTGAATTGGATTCAGGCAGTTTGTGCAAATTATGATTGTGGGGTTGACAATTTTGATTCATTAGTTGATGGAAAAGCTATCTGGTGCTTACTTGATTATTATTTCCAGAAAGAATTTCATAGTTCCTGTTTAATGAAGGAAGTCGATCCAAAGAGTGGCAAGGAATCAATAATGTCTGTCAACGATTATTCAGATGCAGTGTACAATTTTATATTATCACAGAGGTTGACAACATTATTAGGAAATTTTCCGGAGGTACTTCAAATAAGCGACCTACTCGAATATAACGGCGCTTCCAGTGATCGAAGTGTAGTGATATTGTTGGTTTTCCTTGCAAGGCAATTATTTGTCAAGAAAAATGTGGATCAATTAAATTTCCATAAGCTCCTTGGTTGTGATTGCCAAAGTCTGTACCGGAAACATTTGAGGATGGAGCAGTGTCTTTCTAATACTGGAGCAGCACACAAGCCGGACGCTTCTGATGTGCATGACAACGAAGATGCTGCAAAAAAATTCAAGGCCATCCAGGCTTGGTGGCAACTCATGGCTGAAAGAAATCAGAAATCTTATATGAAACCGGCTGCGTGTAGACCCATTGAAAGCAGCGCCAACGTCAGAAAAGAAACCGCTGCAATAACAATACAATCACGTTTCAGAAGATTGGTTGCTCGTCGCACGTTTCTTAAAATGCATAATGCTGTCTCTCTTTTGCAAACTGTTTTCCGAGCTTGGCTAGAAGTGAGGCAGGAGTCATCGTTCTCCTTCGTCCAAGGTCAAAATTTTTCATGTGCGATACACAAGAGACCAGAAACACATAGGAGAGATGCCATGTTTTTCGTTCAAAGGCACTCTTTCTTGAAGCTAAAGAGGTCCGCATTGCTTATCCAGCAAGCAGTGCGGAGTTGGCTCTCTTGGAGGCATCAGCAGGAATGCAGTATACTTCCTCAATTGACGGCTTCAGATCCAGTGGCTGCTGCCACTACTGTTCAGAAATTTGTTCGTGGTTGGATGGCACGATCTAGATATAATCACATGCTTGAGCAGCAAGAGAAAGCTTCGTATTTGTACTCACAAAAGGTTATGTTTGAACTTCAAACGAAAGCGGCCATCAGGATTCAGCTTGCTTGGAAGAGGTATATGTGCTGCAAGTTTACTCAGAGGCACTTCTGTGCGACAATAATTCAAAGCAGCTTTCGTAGGTGGCGGTTAAGAAGAATATATTTGAATCAGATTCAAGCTGTTCTGAAAATCCAATGTTATTTTCGAATGTCTGCTAGTGTAAAGACTTTTCAACACTTCAAAATGGCATTTAAGGCAGCCATTGTCATTCAATCGTTCACACGTGCATGGATTGCACGGAAGGAAGCTTATGCACGTAGAAGTCGCATCGTTTCAATTCAAAGGCATTGCCGCGCTTGGCTGGCGAGAAGGGACTTCATGTGCCAAAGAGGCGCTGCAATGAAGATCCAGACCGTCATTCTTAGTCTGAAGTACCAGAAGGCTCTCAATTGTCGGAAAGATGCAGTGCTGCAGATTCAGCGTTTTATTAGGGGGCATTTATCACGAAATAGACTCTTGGGGGGTGCATCTCGTCAACGCGCAATGGTTCCAAGTGGTTGCATTTTAAGATCAGCTGGTTACTCTAGTTTTCAACTGGAACTATATCTGTGTTCTGTTCTGAAATTGCAGCGGTGGTGGAGGGGTGTCTTGCTACACAAGTTAAGAACAAAGTCTGTAGTTATAATCCAATCGTGTACTCGGGGGTGGATTGCTAGGCGAATGGCAACTGTTCGCAGACACCATGTTATTGTCATTCAATCCCACTGGAAAGGTTACCTTGCTCGGAAGGAGTCAAGAGAGCAGCTGCGAGACTTGCGCTTGAGGGTAAAGAAGTCTGCCAGAAATGTGGACGATAGCAAGCGTCTCATAAACAGACTTCTCCTGGCGCTTTCAGAGCTGCTTCATATGAAGAGTGTCAGTGGCATCCTTCATACTTGTGCAACGTTGGACATGGCTACGGAACATTCCCAGAAATGTTGTGAAGAACTTGTCGCCGCAGGGGCTATTGACAAGTTGCTGACGCTTATTCGCTCAGTAAGCCGAAGTATACCTGATCAGGAGGTTCTTAAGCATGCTCTGTCAACTCTCCGAAATCTAGCCCGCTACCCTCACCTACTTGAATTGCTGATCCAAAGCAACGGTTCCATGCAGACAATCCTCTGGGAATTACTGAGGAATAAGGAGGACAGTTACTTTATTGCTTCGGAACTTTTGATGAAGATATCTTCAACTCCTAAAGGTGTTGAATCGTTACGCAAGTTACCTGCTCTTGTAAAACGACTGCATGCTCTTGTTGAGGAGCTTACACGGAAGGGAATCTACGAGAAAAGAAATGGCAGAGCTCCTAGTGCAGTAATAAGAGAGAATAGAGAGAGGAGATTGAAGGAGGCTGCTGGGATTCTCAAACTGATAACAAATGCCTAA 4155 0.4332 MDGDEPPCPSPHVSSSSIFKDISNFKTPKRPSYNLNFQSPCQKFFTASKQTPHSSAFRRRPSVAPPSSARTKKSAAAARKLKAFELEQSQSSRKAQIKKEQSLKSLAKSITVWLNFLFENPATCGCNLSIGGIRMGDKHSEAEATKGKRDSGPGISIGVDKAWRTPKRQRKIWSRAEDNVGNENTPLELPNSMFSHLRESLEDVCSFDDLKQRMRIYLNLGSCKEIFEVMNQVTKNIDEGRLKLKPHCPIVTDLGLKNKATRILMSYNPIWLRIGLYIIFGGDSLVPNGDDDSEQEITFLKMVIDKQFFSHAGLAKAYAYNKMVDGLYRPGYYENLGNVILKRILLIVLTLDRIKSQSCLSLKYGIDGLDGGSPLLFKADSWIKSSGQVISEFLSSEVMHGEGNLLAHLVIIGYKVSHQQGPLVEYDFKVRDLFVDLQDGLKLCRAIQLLQHDSSILTKIVVPSDTYKKNLANCGLALQYLKKAGVLLHDEDNMMIEAEDVANGDKELVLSLLWNIFVHLQLPLLVDKSCLLEEIGKIRGLGVNAINNANSSSLELLLNWIQAVCANYDCGVDNFDSLVDGKAIWCLLDYYFQKEFHSSCLMKEVDPKSGKESIMSVNDYSDAVYNFILSQRLTTLLGNFPEVLQISDLLEYNGASSDRSVVILLVFLARQLFVKKNVDQLNFHKLLGCDCQSLYRKHLRMEQCLSNTGAAHKPDASDVHDNEDAAKKFKAIQAWWQLMAERNQKSYMKPAACRPIESSANVRKETAAITIQSRFRRLVARRTFLKMHNAVSLLQTVFRAWLEVRQESSFSFVQGQNFSCAIHKRPETHRRDAMFFVQRHSFLKLKRSALLIQQAVRSWLSWRHQQECSILPQLTASDPVAAATTVQKFVRGWMARSRYNHMLEQQEKASYLYSQKVMFELQTKAAIRIQLAWKRYMCCKFTQRHFCATIIQSSFRRWRLRRIYLNQIQAVLKIQCYFRMSASVKTFQHFKMAFKAAIVIQSFTRAWIARKEAYARRSRIVSIQRHCRAWLARRDFMCQRGAAMKIQTVILSLKYQKALNCRKDAVLQIQRFIRGHLSRNRLLGGASRQRAMVPSGCILRSAGYSSFQLELYLCSVLKLQRWWRGVLLHKLRTKSVVIIQSCTRGWIARRMATVRRHHVIVIQSHWKGYLARKESREQLRDLRLRVKKSARNVDDSKRLINRLLLALSELLHMKSVSGILHTCATLDMATEHSQKCCEELVAAGAIDKLLTLIRSVSRSIPDQEVLKHALSTLRNLARYPHLLELLIQSNGSMQTILWELLRNKEDSYFIASELLMKISSTPKGVESLRKLPALVKRLHALVEELTRKGIYEKRNGRAPSAVIRENRERRLKEAAGILKLITNA 1384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4886g00063 1384 Gene3D - 1186 1383 IPR011989 -
Pral4886g00063 1384 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1244 1291 IPR000225 GO:0005515
Pral4886g00063 1384 ProSiteProfiles IQ motif profile. 995 1022 IPR000048 GO:0005515
Pral4886g00063 1384 SMART arm_5 1233 1278 IPR000225 GO:0005515
Pral4886g00063 1384 Gene3D - 415 521 IPR036872 -
Pral4886g00063 1384 ProSiteProfiles IQ motif profile. 1155 1183 IPR000048 GO:0005515
Pral4886g00063 1384 Pfam IQ calmodulin-binding motif 1159 1174 IPR000048 GO:0005515
Pral4886g00063 1384 Pfam IQ calmodulin-binding motif 1133 1150 IPR000048 GO:0005515
Pral4886g00063 1384 Pfam IQ calmodulin-binding motif 995 1012 IPR000048 GO:0005515
Pral4886g00063 1384 Pfam IQ calmodulin-binding motif 767 784 IPR000048 GO:0005515
Pral4886g00063 1384 Pfam IQ calmodulin-binding motif 947 964 IPR000048 GO:0005515
Pral4886g00063 1384 Pfam IQ calmodulin-binding motif 1019 1036 IPR000048 GO:0005515
Pral4886g00063 1384 Pfam IQ calmodulin-binding motif 881 899 IPR000048 GO:0005515
Pral4886g00063 1384 Pfam IQ calmodulin-binding motif 1064 1082 IPR000048 GO:0005515
Pral4886g00063 1384 Pfam IQ calmodulin-binding motif 1115 1130 IPR000048 GO:0005515
Pral4886g00063 1384 Gene3D - 548 674 IPR036872 -
Pral4886g00063 1384 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1115 1178 IPR027417 -
Pral4886g00063 1384 Coils Coil 1172 1192 - -
Pral4886g00063 1384 ProSiteProfiles IQ motif profile. 764 792 IPR000048 GO:0005515
Pral4886g00063 1384 PANTHER UNCHARACTERIZED 39 866 - -
Pral4886g00063 1384 Gene3D - 945 993 - -
Pral4886g00063 1384 Gene3D - 1129 1183 - -
Pral4886g00063 1384 Gene3D - 994 1040 - -
Pral4886g00063 1384 Gene3D - 763 810 - -
Pral4886g00063 1384 Gene3D - 880 944 - -
Pral4886g00063 1384 ProSiteProfiles IQ motif profile. 881 908 IPR000048 GO:0005515
Pral4886g00063 1384 SMART iq_5 1015 1037 IPR000048 GO:0005515
Pral4886g00063 1384 SMART iq_5 786 808 IPR000048 GO:0005515
Pral4886g00063 1384 SMART iq_5 921 942 IPR000048 GO:0005515
Pral4886g00063 1384 SMART iq_5 878 900 IPR000048 GO:0005515
Pral4886g00063 1384 SMART iq_5 844 866 IPR000048 GO:0005515
Pral4886g00063 1384 SMART iq_5 1154 1176 IPR000048 GO:0005515
Pral4886g00063 1384 SMART iq_5 966 988 IPR000048 GO:0005515
Pral4886g00063 1384 SMART iq_5 1131 1153 IPR000048 GO:0005515
Pral4886g00063 1384 SMART iq_5 763 785 IPR000048 GO:0005515
Pral4886g00063 1384 SMART iq_5 992 1014 IPR000048 GO:0005515
Pral4886g00063 1384 SMART iq_5 1061 1083 IPR000048 GO:0005515
Pral4886g00063 1384 SMART iq_5 943 965 IPR000048 GO:0005515
Pral4886g00063 1384 CDD CH_ASPM_rpt1 405 516 - -
Pral4886g00063 1384 SUPERFAMILY Calponin-homology domain, CH-domain 322 603 IPR036872 -
Pral4886g00063 1384 ProSiteProfiles IQ motif profile. 1062 1091 IPR000048 GO:0005515
Pral4886g00063 1384 MobiDBLite consensus disorder prediction 10 25 - -
Pral4886g00063 1384 SUPERFAMILY ARM repeat 1201 1343 IPR016024 -
Pral4886g00063 1384 Pfam Armadillo/beta-catenin-like repeat 1233 1278 IPR000225 GO:0005515
Pral4886g00063 1384 ProSiteProfiles Calponin homology (CH) domain profile. 399 521 IPR001715 GO:0005515
Pral4886g00063 1384 MobiDBLite consensus disorder prediction 48 74 - -
Pral4886g00063 1384 ProSiteProfiles IQ motif profile. 1132 1159 IPR000048 GO:0005515
Pral4886g00063 1384 ProSiteProfiles IQ motif profile. 1016 1045 IPR000048 GO:0005515
Pral4886g00063 1384 MobiDBLite consensus disorder prediction 1 25 - -
Pral4886g00063 1384 Pfam Calponin homology (CH) domain 429 520 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4886g00063 Pral-Chr4886 411243 421310 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4886g00063 1010 1190 Myosins gene family AT5G43900 28.042 3.73e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4886g00063 K16743 - jre:108981478 1610.89