Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4886g00057 ATGGATTGTTTCCCATGCTGCAATAAGCAAGTTGAAACGGTTCCTTTGAGCAAAAGCCAAATGGACTATGCACCGTCCAGGAAATCCACGTTGAAATCTTTTTTAGGGGCTCTCTCTTCCAAAACAGGTAGCAGCAGGCAAAGACACATTACAGCTGAGATACGAAAATATGGAACAGCCAAGAACAATGCCCGAGTCTTCACAGTTCAAGAACTCGCCTCTGCAACTGACAACTTCAGTTCTGACTGTTTGATCGGTGAAGGTGGTTTTGGCAATGTCTACAAAGGATATATACAAAGCATTAATCAAGCTGTGGCCGTGAAGCGACTGGACAGGAATAAATTGCAAGGAAGTAGAGAATTCTTTTCAGAAGTTGTAACGTTGAGTTTGGTGAAGCACCCAAACCTCGTCAAGCTCATAGGTTATTGTGTTGAAGGAGATCAACGGATGTTAGTTTATGAATTGATGTCCAAGGGCAGCCTCGAAAGCCACCTTCTAGATTTAGGACCAGATAAGGAGGGACTGGATTGGGCAACGAGAATGAAAATAGCAGAAGGAGCAGCGAGAGGATTGGAGTATCTGCATGAAGAAGCAGATCCACCGATAATATACAGAGACTTGAAGGCATCGAACATATTGTTGGATGAGAACTTCAATGCGAAGCTGTCAGATTTTGGGCTGGCAAAGATGGGACCAACAGAAGAAGGGAAGGATCACGTGTCGACGAGGGTGATGGGAACATTTGGGTATTGTTCTCCAGAGTATGCTTTGACGGGGCGTGTCACTACAAAGTCAGATGTTTATAGTTTTGGAGTAGTGTTAATGGAGATCATCACTGGAAGAAGAGTGTATGACACTGCTAGAGCAGAAGAAGAGCAAAACCTTATTGACTGGGCACAGCCACTGCTAGAGGACAGAGAGAAGTTCACATTAATGGCAGATCCATTGCTGAAAGGTAACTTCCCAGTGAAGGGACTGTTTAAAGCACTTGCAGTGGCAGCCATGTGTCTGCAGGAAGAAGCAGACACAAGACCATTGATGAGTGATGTAGTAACAGCGCTTCAGCACATAACACTCCCAGTAAATGGTGAAGAAGATGAACTTAACAAAGGAGAATCTGTAAAAGTTGCAGGCCATGTTGAATCATTTAGGGTTGGAAGCTCACGTGTAGACAGTCAACAATATCAAACAAGGGTTGGAAGTTCAAGCGTAGGCCGTCAACAACATCACAGAGTGGGAAGTTCAAGTATAGGCCATCAAAACCATCACAGGGCTGGAAGTTCAAGTGCAGGCCATCAAAACCATCACAGGGTTGGAAGTTCAAGTGTGGGCCATCAACAACATCACAGGGTTGGGAGTTCAAGTGTAGATCAACAAAATCAACAATTGTAG 1392 0.444 MDCFPCCNKQVETVPLSKSQMDYAPSRKSTLKSFLGALSSKTGSSRQRHITAEIRKYGTAKNNARVFTVQELASATDNFSSDCLIGEGGFGNVYKGYIQSINQAVAVKRLDRNKLQGSREFFSEVVTLSLVKHPNLVKLIGYCVEGDQRMLVYELMSKGSLESHLLDLGPDKEGLDWATRMKIAEGAARGLEYLHEEADPPIIYRDLKASNILLDENFNAKLSDFGLAKMGPTEEGKDHVSTRVMGTFGYCSPEYALTGRVTTKSDVYSFGVVLMEIITGRRVYDTARAEEEQNLIDWAQPLLEDREKFTLMADPLLKGNFPVKGLFKALAVAAMCLQEEADTRPLMSDVVTALQHITLPVNGEEDELNKGESVKVAGHVESFRVGSSRVDSQQYQTRVGSSSVGRQQHHRVGSSSIGHQNHHRAGSSSAGHQNHHRVGSSSVGHQQHHRVGSSSVDQQNQQL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4886g00057 463 PANTHER OS07G0668900 PROTEIN 3 359 - -
Pral4886g00057 463 FunFam Serine/threonine-protein kinase PBS1 156 372 - -
Pral4886g00057 463 FunFam probable serine/threonine-protein kinase RLCKVII 51 155 - -
Pral4886g00057 463 MobiDBLite consensus disorder prediction 386 463 - -
Pral4886g00057 463 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524
Pral4886g00057 463 Gene3D Phosphorylase Kinase; domain 1 39 155 - -
Pral4886g00057 463 SUPERFAMILY Protein kinase-like (PK-like) 61 355 IPR011009 -
Pral4886g00057 463 MobiDBLite consensus disorder prediction 385 463 - -
Pral4886g00057 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Pral4886g00057 463 Gene3D Transferase(Phosphotransferase) domain 1 156 377 - -
Pral4886g00057 463 SMART serkin_6 79 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4886g00057 463 Pfam Protein tyrosine and serine/threonine kinase 84 296 IPR001245 GO:0004672|GO:0006468
Pral4886g00057 463 ProSiteProfiles Protein kinase domain profile. 79 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4886g00057 463 CDD STKc_IRAK 85 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4886g00057 Pral-Chr4886 378154 381409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4886g00057 64 354 Glycoside Hydrolase AT3G07070 67.010 3.88e-143 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pral4886g00057 PK_Tyr_Ser-Thr 7.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4886g00057 - - pcin:129285479 805.438