Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4886g00041 ATGGCTGCCTCCCACCAATCTCTCCTTCACAAACCCAACAAATCCATTTCCAGGACCATGTGGATTCTTCTCTCTCTAGCTGCTCTCGTCAGTTCTGCTCTTTTTGCTTCTTATTTCTTCACACCCTCCTCCTCCTTCTTCAACCTCTCTCTTCCCCCTCATCATCCTCTATGTGATCATGCCCTTCACAGATCTTCATGCCTTGCCCACGTCTCTGAATTAACTAAAGCTTCGACCTTTAACCACCAAAACTCCAAACTGCTTCAATCTTTCCTGAGCAAATCCACCTCACAAATTCAGAAAACTGTGGACTCAACCAAAGCCATCAAATACAGAATCAACGATCCAAAACAGCAGCAAGCTCTGCTTGTCTGTGAGCAACTTCTGGACTCGTCCCTTGATAGGGTTTGGGACTCTGTGGTGGCTCTCACAGAGAACACCACCAAATCCTACCAGGATGCTCACACATGGCTCAGCACCGTCCTCACTAACCACATCACTTGCTTGGATGAGTTAGAAGGAGCAGGCTCCGCTCGAGCCCTTATCGAGTCTGAGCTCAACGACTTGGTCTCCAGAGCCAGAACCTCCCTAGCCATGCTTGTTCATGCCATGCCCTCTAACACTGAAACTATTGAGGAGCCACTGAATGGAGAATTTCCCTCATGGGTGACCAGTAAGGACAGGAAGCTTCTGGAGGCTTCTGCGAATGATATAAATGCTAACGTTGTGGTGGCCAAGGACGGAAGTGGCAGGTTCAAAACTGTGAAGGAGGCCGTGGCTGCGGCACCTGATAACAGTAAGACGAGGTATGTTATATATGTGAAGAAGGGAGTTTATAAAGAGAATGTTGAGATTGGATCCAAGAAGAAGAATGTGATGCTTGTGGGTGATGGTAAAGATAAGACGATCATCACTGGAAGTTTGAATTTCGATGATGGAACTTCCACCTTCAGAACTGCCACCGTCGCTGCGGTTGGAGATGGATTCATAGGCCAAGACATATGGTTCCAGAACACGGCGGGCCCTCAGAAGCACCAAGCGGTGGCTCTCCGCGTCGGAGCCGATCGCTCCGTCATCAACCGCTGCCGTGTAGACGCCTACCAAGATACCCTGTATGCCCACTCCAACAGGCAATTCTACCGTGACTCCATCATCATGGGCACCGTCGACTTCGTCTTCGGCAACGCGGCCGTGGTGTTCCAGAAATGCTTCCTAGAGGCTCGAAGGCCAATGGATAAACAGAACAACATGGTCACTGCACAAGCACGCGACGACCCAAACCAGAACACAGGGACTTCAATCCAGCAATGTAACCTAACACCAAGCTCTGATCTCAAGCCAGTGATCGGTTCAGTGAAGACCTTTCTGGGTCGTCCATGGAAGGAGTTCTCTCGAACTGTGGTGATGCAATCGTTCCTGAGCACCCACATTGATCCAGCAGGATGGGCTCCATGGGACGACAAGCAATCCACGCTGAAGAATCTGTATTATGGAGAGTACAAGAACAGAGGACCCGGTGCTGGGACAGCCAAGAGAGTGAAGTGGCCTGGGTTCCATGTGATTACAAGTGCTTCTGAGGCAAGCAAATTCACAGTGGCTCAGCTCATTCAAGGCAGGACTTGGCTCAAGAACACTGGGGTCGCCTTCATTGAAGGGCTCTAA 1662 0.5012 MAASHQSLLHKPNKSISRTMWILLSLAALVSSALFASYFFTPSSSFFNLSLPPHHPLCDHALHRSSCLAHVSELTKASTFNHQNSKLLQSFLSKSTSQIQKTVDSTKAIKYRINDPKQQQALLVCEQLLDSSLDRVWDSVVALTENTTKSYQDAHTWLSTVLTNHITCLDELEGAGSARALIESELNDLVSRARTSLAMLVHAMPSNTETIEEPLNGEFPSWVTSKDRKLLEASANDINANVVVAKDGSGRFKTVKEAVAAAPDNSKTRYVIYVKKGVYKENVEIGSKKKNVMLVGDGKDKTIITGSLNFDDGTSTFRTATVAAVGDGFIGQDIWFQNTAGPQKHQAVALRVGADRSVINRCRVDAYQDTLYAHSNRQFYRDSIIMGTVDFVFGNAAVVFQKCFLEARRPMDKQNNMVTAQARDDPNQNTGTSIQQCNLTPSSDLKPVIGSVKTFLGRPWKEFSRTVVMQSFLSTHIDPAGWAPWDDKQSTLKNLYYGEYKNRGPGAGTAKRVKWPGFHVITSASEASKFTVAQLIQGRTWLKNTGVAFIEGL 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4886g00041 553 FunFam Pectinesterase 235 553 - -
Pral4886g00041 553 PANTHER PECTINESTERASE 35 543 - -
Pral4886g00041 553 ProSitePatterns Pectinesterase signature 1. 266 285 IPR018040 -
Pral4886g00041 553 Pfam Pectinesterase 241 538 IPR000070 GO:0030599|GO:0042545
Pral4886g00041 553 Pfam Plant invertase/pectin methylesterase inhibitor 57 189 IPR006501 GO:0004857
Pral4886g00041 553 SMART PMEI_2 42 199 IPR006501 GO:0004857
Pral4886g00041 553 CDD PMEI-like_4 65 201 - -
Pral4886g00041 553 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Pral4886g00041 553 NCBIfam pectinesterase inhibitor domain 55 177 IPR006501 GO:0004857
Pral4886g00041 553 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 202 IPR035513 -
Pral4886g00041 553 SUPERFAMILY Pectin lyase-like 239 552 IPR011050 -
Pral4886g00041 553 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 199 IPR035513 -
Pral4886g00041 553 Gene3D - 235 553 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4886g00041 Pral-Chr4886 243526 245896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4886g00041 1 553 Carbohydrate Esterase AT1G11580 54.741 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4886g00041 K01051 - gmx:100815836 767.689