Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4886g00033 ATGGCTGCTTCAGAGCATTCTTCCACTGACGAAGTCTTGGAGAACCTTCAAGAGGAAACCAGCAAAGAATCAAAGCTAGAATTTTCCAGCGATGAGGAAGAGTTGATTACCAGAATGTATAATCTAGTTGGTGAAAGGTGGGCTTTGATAGCTGGGAGGATCCCAGGAAGAACAGCCGAAGAAATCGAAAAGTACTGGACTGCCACATACTCAACAAGTGACTGA 225 0.4444 MAASEHSSTDEVLENLQEETSKESKLEFSSDEEELITRMYNLVGERWALIAGRIPGRTAEEIEKYWTATYSTSD 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4886g00033 74 MobiDBLite consensus disorder prediction 11 30 - -
Pral4886g00033 74 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 27 71 - -
Pral4886g00033 74 Pfam Myb-like DNA-binding domain 27 66 IPR001005 -
Pral4886g00033 74 Gene3D - 27 69 - -
Pral4886g00033 74 FunFam MYB-like transcription factor 27 69 - -
Pral4886g00033 74 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Pral4886g00033 74 CDD SANT 27 66 IPR001005 -
Pral4886g00033 74 SMART sant 24 72 IPR001005 -
Pral4886g00033 74 SUPERFAMILY Homeodomain-like 27 70 IPR009057 -
Pral4886g00033 74 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 74 IPR017930 -
Pral4886g00033 74 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4886g00033 Pral-Chr4886 211708 212523 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4886g00033 29 68 MYB Transcription Factor Family AT5G35550 65.000 2.65e-14 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4886g00033 Myb_DNA-binding 2.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4886g00033 - - pcin:129298854 139.043