Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4886g00021 ATGAGTAGGAATAATAAAAGGAACCTGCTGAGAAGCATTTTCAGAGCAAATGGAGGGTGTGGCAATTGTGGCAACCCGAAGCCCTTTGACATATACGACCCCACACCTAAGCCTAAAATCTGCTGCCATCCAAATCCAGATCCTCCGACCACCGTAACTTCATCGGCATCCATTCCCCAGTCGGTCTCGGCGGAGGATTCCATGAGCGGGAAACTGAGCGGCAGCGTCGTGGTGGAGATGAAGTCGGAAAACCCATATAATGACTTCAAGGACTCCATCATCCAAATGATAATGGAGAGAGAGATTTACTCAGCGAGTGAGGTGGGAGAGCTTCTCCAGTGGTTTCTTAAGCTCAATTTGCCATGTCATCACCAACTCATCCTCAGGGCTTTCGCCGATATCTGCCAACAGGCTTCGCCTCCCTCATGA 429 0.4988 MSRNNKRNLLRSIFRANGGCGNCGNPKPFDIYDPTPKPKICCHPNPDPPTTVTSSASIPQSVSAEDSMSGKLSGSVVVEMKSENPYNDFKDSIIQMIMEREIYSASEVGELLQWFLKLNLPCHHQLILRAFADICQQASPPS 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4886g00021 142 ProSiteProfiles OVATE domain profile. 78 137 IPR006458 -
Pral4886g00021 142 MobiDBLite consensus disorder prediction 47 68 - -
Pral4886g00021 142 NCBIfam uncharacterized plant-specific domain TIGR01568 76 136 IPR006458 -
Pral4886g00021 142 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 57 135 IPR038933 GO:0045892
Pral4886g00021 142 MobiDBLite consensus disorder prediction 43 68 - -
Pral4886g00021 142 Pfam Transcriptional repressor, ovate 82 137 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4886g00021 Pral-Chr4886 146369 146797 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pral4886g00021 Ovate 8.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4886g00021 - - pcin:129315062 178.333