Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4886g00012 ATGAAAGCACAGACGCCACAGGTGGATTGTTCAGGCCCTACTTATGCCCCTAACAGCACATATCACTCAAATCTCAATCGCTTACTCTCAAATCTTTCCTCAAACGCCAGTCGTAGCGATGGCTTTTACAACACCACCGTCGGACAAAATGGCGACGCTGTCTACGGCCTCTACCTCTGCCGCGGAGACACCGCCGTCTCCGCCTGTCAAGCATGTGTTTCCCAGGCAACCAAAGATATCAGGCAATGCCTCAATTATACACGAGCCGTGGGTTGGTACGAAAAGTGCACGTTACGATACTCCGACGCCGATTTCTTCTCCATAGAGCAAGATGACCCCACTCGCGTCCTCTACAACAACGGCAATGCAGCAGACCCCAAAAGCTTCATGCAACTGGTGATTGATACCATGAATGTGGTGGCGAAAGAAGCGGCGTACGGCGGCAGCGGGAGCAAGAAATATGCGACGAGAGAACAAAACTACAGTTCTTTTCAAACTCTGTATACTATGGCGCAGTGCACGCCGGATATATCTAGAGATGACTGTTATAACTGTTTGAGAAGAACAATCGGAGAGTATCCGAATTGCTGTTTTGGGAGGTTAGGGGCCATAGCTCGCGCCTACAGTTGCAACGTAAGGTATGAATTGTACCCCTTTTACGGAGTGATTTCGTCGCTTCCTTCCCCTCGTGTGCCAGAGTCAGCCTTCGCTTCCAATGATAAAAGCAAGATTTCGGCAGTGGCAATGATTGCCATAGTGGTTCAGTCGGCAATATTCATATTGCAAGTCTCGCTCTGCTTCTTGTGCCTTAGATGGTGGAGAGCCAGGAAGAATGCTTCACTTCCTAAAACTGCTGAGATTTCAGAGTCACTACATTTTGATTTGGATAGCATCAAAACAGCAACAAACGACTTCTGCCCCGACAATAAACTTGGTCAAGGAGGATATGGGGAGGTGTACAAGGGCATTTTACCAGGTGGACAAGAGTTAGCTGTGAAGAGATTATCAAATAGTTCCAAACAAGGTGTACTAGAATTTAAGAATGAAGTAGTTACCATGGCAAAGCTTCAACATAGAAATCTCGTCAGGTTTCTCGGATTTTGTTTAGAAGAGGAAGAAAAGATACTCGTTTATGAATATTTGTCCAACAAAAGCTTGGATAATTTTTTGTTTGAGGCAGAAAACAAAGGTAAATTGAATTGGTCAAATCGATACAATATTATTGAAGGGATTGCGAGGGGGATAAGTTATCTTCATGAAGATTCTCAACTCAAAATTATACACCGCGATCTCAAATCTAGTAATGTATTGTTGGATGAAGATTTGAATCCAAAAATATCTGATTTTGGAATGGCTAGAATTTTCCAAGCTGATCAAACCCATGCCGACACAAGTAAAGTTGTTGGTACATTATCATCAGCGGCAAGAAGAATACATCTTTCTATGCGTCAAATTATGCTGAAAACCTCGCAACCTATGCCTGGAAACTCTGGAGGGAAGGAACACCATTGGAATTGCTGGATCCTAGTCTAA 1533 0.4416 MKAQTPQVDCSGPTYAPNSTYHSNLNRLLSNLSSNASRSDGFYNTTVGQNGDAVYGLYLCRGDTAVSACQACVSQATKDIRQCLNYTRAVGWYEKCTLRYSDADFFSIEQDDPTRVLYNNGNAADPKSFMQLVIDTMNVVAKEAAYGGSGSKKYATREQNYSSFQTLYTMAQCTPDISRDDCYNCLRRTIGEYPNCCFGRLGAIARAYSCNVRYELYPFYGVISSLPSPRVPESAFASNDKSKISAVAMIAIVVQSAIFILQVSLCFLCLRWWRARKNASLPKTAEISESLHFDLDSIKTATNDFCPDNKLGQGGYGEVYKGILPGGQELAVKRLSNSSKQGVLEFKNEVVTMAKLQHRNLVRFLGFCLEEEEKILVYEYLSNKSLDNFLFEAENKGKLNWSNRYNIIEGIARGISYLHEDSQLKIIHRDLKSSNVLLDEDLNPKISDFGMARIFQADQTHADTSKVVGTLSSAARRIHLSMRQIMLKTSQPMPGNSGGKEHHWNCWILV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4886g00012 510 Pfam Salt stress response/antifungal 10 102 IPR002902 -
Pral4886g00012 510 Pfam Salt stress response/antifungal 122 217 IPR002902 -
Pral4886g00012 510 FunFam Cysteine-rich receptor-like protein kinase 10 273 380 - -
Pral4886g00012 510 ProSiteProfiles Gnk2-homologous domain profile. 3 105 IPR002902 -
Pral4886g00012 510 SMART serkin_6 305 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4886g00012 510 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 3 105 - -
Pral4886g00012 510 Gene3D - 113 219 IPR038408 -
Pral4886g00012 510 Gene3D - 4 105 IPR038408 -
Pral4886g00012 510 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 381 472 - -
Pral4886g00012 510 ProSiteProfiles Gnk2-homologous domain profile. 111 219 IPR002902 -
Pral4886g00012 510 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 12 471 - -
Pral4886g00012 510 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Pral4886g00012 510 Gene3D Phosphorylase Kinase; domain 1 271 380 - -
Pral4886g00012 510 Pfam Protein kinase domain 308 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4886g00012 510 SUPERFAMILY Protein kinase-like (PK-like) 286 471 IPR011009 -
Pral4886g00012 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Pral4886g00012 510 ProSiteProfiles Protein kinase domain profile. 305 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4886g00012 510 Gene3D Transferase(Phosphotransferase) domain 1 381 487 - -
Pral4886g00012 510 FunFam Cysteine-rich receptor-like protein kinase 25 113 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4886g00012 Pral-Chr4886 109066 111594 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4886g00012 15 470 Receptor kinase-like Gene Family AT4G23220 44.304 1.43e-130 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4886g00012 Pkinase 2.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4886g00012 - - cave:132168824 476.092