Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4886g00011 ATGAAAGCACAGACGCCACAGGTGGATTGTTCAGGCCCTACTTATGCCCCTAACAGCACATATCACTCAAATCTCAATCGCTTACTCTCAAATCTTTCCTCAAACGCCAGTCGTAGCGATGGCTTTTACAACACCACCGTCGGACAAAATGGCGACGCTGTCTACGGCCTCTACCTCTGCCGCGGAGACACCGCCGTCTCCGCCTGTCAAGCATGTGTTTCCCAGGCAACCAAAGATATCAGGCAATGCCTCAATTATACACGAGCCGTGGGTTGGTACGAAAAGTGCACGTTACGATACTCCGACGCCGATTTCTTCTCCATAGAGCAAGATGACCCCACTCGCGTCCTCTACAACAACGGCAATGCAGCAGACCCCAAAAGCTTCATGCAACTGGTGATTGATACCATGAATGTGGTGGCGAAAGAAGCGGCGTACGGCGGCAGCGGGAGCAAGAAATATGCGACGAGAGAACAAAACTACAGTTCTTTTCAAACTCTGTATACTATGGCGCAGTGCACGCCGGATATATCTAGAGATGACTGTTATAACTGTTTGAGAAGAACAATCGGAGAGTATCCGAATTGCTGTTTTGGGAGGTTAGGGGCCATAGCTCGCGCCTACAGTTGCAACGTAAGGTATGAATTGTACCCCTTTTACGGAGTGATTTCGTCGCTTCCTTCCCCTCGTGTGCCAGAGTCAGCCTTCGCTTCCAATGATAAAAGCAAGATTTCGGCAGTGGCAATGATTGCCATAGTGGTTCAGTCGGCAATATTCATATTGCAAGTCTCGCTCTGCTTCTTGTGCCTTAGATGGTGGAGAGCCAGGAAGAATGCTTCACTTCCTAAAACTGCTGAGATTTCAGAGTCACTACATTTTGATTTGGATAGCATCAAAACAGCAACAAACGACTTCTGCCCCGACAATAAACTTGGTCAAGGAGGATATGGGGAGGTGTACAAGGGCATTTTACCAGGTGGACAAGAGTTAGCTGTGAAGAGATTATCAAATAGTTCCAAACAAGGTGTACTAGAATTTAAGAATGAAGTAGTTACCATGGCAAAGCTTCAACATAGAAATCTCGTCAGGTTTCTCGGATTTTGTTTAGAAGAGGAAGAAAAGATACTCGTTTATGAATATTTGTCCAACAAAAGCTTGGATAATTTTTTGTTTGAGGCAGAAAACAAAGGTAAATTGAATTGGTCAAATCGATACAATATTATTGAAGGGATTGCGAGGGGGATAAGTTATCTTCATGAAGATTCTCAACTCAAAATTATACACCGCGATCTCAAATCTAGTAATGTATTGTTGGATGAAGATTTGAATCCAAAAATATCTGATTTTGGAATGGCTAGAATTTTCCAAGCTGATCAAACCCATGCCGACACAAGTAAAGTTGTTGGTACATTCGGTTACATTGCTCCTGAATATGCAATGCATGGTCATATTTCAGTCAAATCTGATATATATAGTTTTGGCATCCTAATCCTGGAGATCATCAGCGGCAAGAAGAATACATCTTTCTATGCGTCAAATTATGCTGAAAACCTCGCAACCTATGCCTGGAAACTCTGGAGGGAAGGAACACCATTGGAATTGCTGGATCCTAGTCTAAGAAATTCATGTCCAGGAAATGAAGTTATTAAATGCATTCATATAAGCTTGTTGTGTATCCAGGAAAGTCCAGCTCTGAGACCAACGATACAATTTATTATGGTGATGCTAGGTAGTCACTCCGTCACCCTGCCAGATCCTCAGCAGCCAGCTTTTTTGTTTAATTGCCATAGAACAGATTCAAACAATCAGGCAAGCTTTGAGAACAGCTCGGATCAATCTACAGGCAGGTCTATGCAAAGATCTGTGGATGAAGATCCAATTTCTGACATGTATCCTCGTTAG 1902 0.4343 MKAQTPQVDCSGPTYAPNSTYHSNLNRLLSNLSSNASRSDGFYNTTVGQNGDAVYGLYLCRGDTAVSACQACVSQATKDIRQCLNYTRAVGWYEKCTLRYSDADFFSIEQDDPTRVLYNNGNAADPKSFMQLVIDTMNVVAKEAAYGGSGSKKYATREQNYSSFQTLYTMAQCTPDISRDDCYNCLRRTIGEYPNCCFGRLGAIARAYSCNVRYELYPFYGVISSLPSPRVPESAFASNDKSKISAVAMIAIVVQSAIFILQVSLCFLCLRWWRARKNASLPKTAEISESLHFDLDSIKTATNDFCPDNKLGQGGYGEVYKGILPGGQELAVKRLSNSSKQGVLEFKNEVVTMAKLQHRNLVRFLGFCLEEEEKILVYEYLSNKSLDNFLFEAENKGKLNWSNRYNIIEGIARGISYLHEDSQLKIIHRDLKSSNVLLDEDLNPKISDFGMARIFQADQTHADTSKVVGTFGYIAPEYAMHGHISVKSDIYSFGILILEIISGKKNTSFYASNYAENLATYAWKLWREGTPLELLDPSLRNSCPGNEVIKCIHISLLCIQESPALRPTIQFIMVMLGSHSVTLPDPQQPAFLFNCHRTDSNNQASFENSSDQSTGRSMQRSVDEDPISDMYPR 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4886g00011 633 SMART serkin_6 305 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4886g00011 633 FunFam cysteine-rich receptor-like protein kinase 10 381 583 - -
Pral4886g00011 633 ProSiteProfiles Gnk2-homologous domain profile. 3 105 IPR002902 -
Pral4886g00011 633 Pfam Protein tyrosine and serine/threonine kinase 309 574 IPR001245 GO:0004672|GO:0006468
Pral4886g00011 633 FunFam Cysteine-rich receptor-like protein kinase 10 273 380 - -
Pral4886g00011 633 Gene3D Phosphorylase Kinase; domain 1 271 380 - -
Pral4886g00011 633 ProSiteProfiles Gnk2-homologous domain profile. 111 219 IPR002902 -
Pral4886g00011 633 MobiDBLite consensus disorder prediction 603 621 - -
Pral4886g00011 633 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Pral4886g00011 633 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 12 617 - -
Pral4886g00011 633 Pfam Salt stress response/antifungal 123 217 IPR002902 -
Pral4886g00011 633 Pfam Salt stress response/antifungal 10 102 IPR002902 -
Pral4886g00011 633 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 3 105 - -
Pral4886g00011 633 MobiDBLite consensus disorder prediction 603 633 - -
Pral4886g00011 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Pral4886g00011 633 Gene3D Transferase(Phosphotransferase) domain 1 381 585 - -
Pral4886g00011 633 Gene3D - 4 105 IPR038408 -
Pral4886g00011 633 Gene3D - 113 219 IPR038408 -
Pral4886g00011 633 CDD STKc_IRAK 311 569 - -
Pral4886g00011 633 ProSiteProfiles Protein kinase domain profile. 305 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4886g00011 633 SUPERFAMILY Protein kinase-like (PK-like) 289 598 IPR011009 -
Pral4886g00011 633 FunFam Cysteine-rich receptor-like protein kinase 25 113 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4886g00011 Pral-Chr4886 109066 111955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4886g00011 14 633 Receptor kinase-like Gene Family AT4G05200 46.544 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4886g00011 PK_Tyr_Ser-Thr 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4886g00011 - - pop:7458565 653.669