Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4886g00010 ATGGATTCCACTAAGGCGTTCCTGCTCCTTGCTCCTCTAATCTTTTTCATAGCAAGAATCAAAGCACAGGAACCACAGGTGGATTGTTCAGGCCTTACTTACGCCCCAAACAGCACATATCACTCAAATCTCAATCGCTTGCTTTCAACGCTTTCCTCAAACGCCAATAGCATTGGTGGCTTTTACAACACCACCGTCGGAAAAAACGACGACGCCGTCTACGGCCTCTACCTCTGCCGGGGAGACACCACCGTCTCCGCCTGTCAAGCATGTGTTTCCCGGGCAACCAAAGATATCAGGCAATGCCTCAATTCTACCCAAGCCGTGGGTTGGTACGACAAGTGCATGTTTCGATACTCCGACGCCGATTTCTTCTCCATAGAGCAAGATGACCCCACTCTCGTGCTCCACAACAGCGGCAACGCAACAGACCCCAAAAGCTTTATGCAACTGGTGATCGATACCATGAATGCGGTGGCCAGAGAAGCGGCGTACGGCGGCGGCGGGGGGAGCAAGAAATTTGCGACGAAAGAAAAAAACTACAGTTCTTTTCAAACTCTGTACACTATGGCTCAGTGCACACCGGATATATCTAGAGATGACTGTTATAACTGTTTGAGAAGAACAATCGGAGAGTATCCGAATTGCTGTTTTGGGAGGTTAGGGGCAATCGCACGCGCCTTCAGTTGCAACGTAAGGTATGAATTGTACCCCTTTTATGGAGTGATTTCGTCGCTTCCTTCCCCTCGTGTGACAGAGTCAGCCTTCACTTCCAATGATAAAGGCAAGATTCCGGGTAGGACAATTATCGCCATAGTAGTTCAAACCGCGATAGTCATACTGCAAGCCTCGTTCTGCTTCTTGTGCCTTAGGTGGTGGAGAGCAAAGAAGAATGCTTCAGTTCCTAAAACTGATGAGACTTCAAGTGTAGAGTCTCTACATTTTGATTTGGATACCATCAAATCAGCCACAAACGACTTCTCTCCCGACAATAAACTAGGCCAAGGTGGGTATGGCGAGGTGTACAAGGGCATTTTACCCGGTGGACAAGAGTTAGCTGTGAAGAGATTATCAAGTAGTTCCAAACAAGGCGTACTAGAATTTAAGAATGAAGTAGTTGCAATGGCAAAACTACATCATAGAAATCTTGTAAGGTTTCTCGGATTTTGTTTGGATGAAGAAGAAAAGATACTCATATATGAATTTTTGCCCAACAAAAGCTTGGATAATTTTTTGTTCGGACTTGAAAACAAGACTAAGTTGAATTGGTCAAATCGATACAAGATTATTGAAGGCATTGCAAGGGGAATACTTTATCTTCACAAAGATTCTCAATTGAAAATCATACATCGTGATCTCAAATGTAGCAATATATTGTTGGATGAAGATCTAAATCCAAAAATATCTGATTTTGGTATGGCTAGAATTTTTGGAACTGATCAAACTCAAGCCAGCACAAGTAAAGTTGTCGGCACATTTGGCTATATCGCTCCTGAATATGCAATGCATGGTCATATTTCAGTGAAATCTGATATATATAGTTTTGGTATCCTAATCCTGGAGATCATCAGTGGCAAGAAGAATACATCTTTCCATGCAACAAATTATGCTGAAAACTTGCCAACCTATGCCTGGAAACTCTGGAGGGAAGGGACACCATTAGAATTGCTGGATCCTAGTGTAAGACAATCTTGTTCAAGCAATGAAGTTATTAAATGCATCCATATAAGCTTTTTGTGTATCCAAGAAAATCCAGCTCTAAGACCTGATATACAATTTATTATGGTGATGCTAAATAGTCATTCCGTCACCCTGCCAGATCCTCAGGAGCCAGCATTTTTGTTTGATCGCCGCCATAGAACAGATTCAAACAACAGTCTAGCAATTTCCGAGGATAGCTCGGATCAATCTAAAAATAAGTCTATGCAACCATCTGTGGATGAAGATCCAATTTCTGACATGCATCCTCGTTAG 1974 0.4296 MDSTKAFLLLAPLIFFIARIKAQEPQVDCSGLTYAPNSTYHSNLNRLLSTLSSNANSIGGFYNTTVGKNDDAVYGLYLCRGDTTVSACQACVSRATKDIRQCLNSTQAVGWYDKCMFRYSDADFFSIEQDDPTLVLHNSGNATDPKSFMQLVIDTMNAVAREAAYGGGGGSKKFATKEKNYSSFQTLYTMAQCTPDISRDDCYNCLRRTIGEYPNCCFGRLGAIARAFSCNVRYELYPFYGVISSLPSPRVTESAFTSNDKGKIPGRTIIAIVVQTAIVILQASFCFLCLRWWRAKKNASVPKTDETSSVESLHFDLDTIKSATNDFSPDNKLGQGGYGEVYKGILPGGQELAVKRLSSSSKQGVLEFKNEVVAMAKLHHRNLVRFLGFCLDEEEKILIYEFLPNKSLDNFLFGLENKTKLNWSNRYKIIEGIARGILYLHKDSQLKIIHRDLKCSNILLDEDLNPKISDFGMARIFGTDQTQASTSKVVGTFGYIAPEYAMHGHISVKSDIYSFGILILEIISGKKNTSFHATNYAENLPTYAWKLWREGTPLELLDPSVRQSCSSNEVIKCIHISFLCIQENPALRPDIQFIMVMLNSHSVTLPDPQEPAFLFDRRHRTDSNNSLAISEDSSDQSKNKSMQPSVDEDPISDMHPR 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4886g00010 657 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 646 - -
Pral4886g00010 657 Pfam Protein tyrosine and serine/threonine kinase 330 595 IPR001245 GO:0004672|GO:0006468
Pral4886g00010 657 SMART serkin_6 327 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4886g00010 657 Gene3D Transferase(Phosphotransferase) domain 1 403 607 - -
Pral4886g00010 657 Gene3D - 24 124 IPR038408 -
Pral4886g00010 657 Gene3D - 133 239 IPR038408 -
Pral4886g00010 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Pral4886g00010 657 ProSiteProfiles Gnk2-homologous domain profile. 130 239 IPR002902 -
Pral4886g00010 657 ProSiteProfiles Protein kinase domain profile. 327 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4886g00010 657 ProSiteProfiles Gnk2-homologous domain profile. 22 124 IPR002902 -
Pral4886g00010 657 SUPERFAMILY Protein kinase-like (PK-like) 310 629 IPR011009 -
Pral4886g00010 657 MobiDBLite consensus disorder prediction 624 657 - -
Pral4886g00010 657 FunFam Cysteine-rich receptor-like protein kinase 10 292 402 - -
Pral4886g00010 657 MobiDBLite consensus disorder prediction 626 646 - -
Pral4886g00010 657 CDD STKc_IRAK 333 599 - -
Pral4886g00010 657 Gene3D Phosphorylase Kinase; domain 1 291 402 - -
Pral4886g00010 657 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Pral4886g00010 657 Pfam Salt stress response/antifungal 140 237 IPR002902 -
Pral4886g00010 657 Pfam Salt stress response/antifungal 29 121 IPR002902 -
Pral4886g00010 657 FunFam Cysteine-rich receptor-like protein kinase 25 132 239 - -
Pral4886g00010 657 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 22 124 - -
Pral4886g00010 657 FunFam cysteine-rich receptor-like protein kinase 10 403 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4886g00010 Pral-Chr4886 101022 104826 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4886g00010 9 657 Receptor kinase-like Gene Family AT4G05200 46.786 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4886g00010 PK_Tyr_Ser-Thr 6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4886g00010 - - tcc:108662469 665.996