Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4886g00008 ATGAGAATAGTAAAAGGAGTTAACAGACTGTCGGCGTGTGGATTGAAATTGATCATCACACCTCCCCCTCTTAGTCAACAGGTGGAGGTTGATGAAAGAATCAAAGGATTGACTTACGTCTGTTCCCCTAAAACTTATGCCCAGAAAAGCACGTTTCAGACAAATCTGAACCACTTACTTTCTTCCCTTTCCTCCAACAGCAATCAAAGTGATGGATTTTACAACACCACCGTCGCCGGGCAAGGAAACAACTCCAACGACACCGTCTACGGCATGTTCCAGTGCTACGGCGATGCGACCGTCCAGGCCTGTCAAAAATGTGTTTCCAACGCAAGCAAAGACATCCTTCAGAGATGCCCCAATAATACAGGAGCCGTCGGGTGGTACGACAAGTGCTGGTTACATTACTCCGACCAGTATTTGTTCTCCAAAACGGACGAATACCCCAGGTTAGTTTATTATAACGTCAACAATGCAACAGACACGACCGGCTTTATGAAGCTGGTGGGTGAAACCTTGAGCGGGGTTGCGAAAAAGGCATCGGAAGGCGGAAGCAAGAAATTTGCGACAAAAACAGTAGACTATGATGCCTTTCAAACTCTGTATACTATGGCGCAGTGCACATCGGATCTATCTGAGATTGATTGTCGCACGTGTCTCAGCAACAGTATTAGCAATTTGCCTATTTGCTGTAATGGAAGAGTGGGCGGAGTAACCGTCACGCCCAGTTGCTTTTTAAGGTATGAAACGTACCCCTTTTACCAGGAAACGGCCCCGCCACCTGCGCTTCCGCCACCAGCTCCTTGGCCGGAATCCACTTCCAAAGTTGATATTTCAAGCGTAGAATCCCTGAAATTTGATTTGGATACCATCAGAACAGCCACAAATGACTTCTCTCCTGACAATAAACTTGGTCAAGGAGGATTTGGTGAGGTTTACAAGGGTGTTCTACCTGGTGGACAAGAGTTAGCCATAAAAAGACTATCAAGCGGTTCAAAACAAGGTGTGGGAGAATTTAAGAATGAAGTTGTTACGATGGCAAAACTTCAACATAGAAATCTCGTAAGATTACTTGGATTTTGTTTGGATGAAGAAGAAAAGATACTCATATACGAATTTTTGCCCAACAGGAGCTTGGATAATTTTTTGTTCGGACTTGAAAACCAAGGTAAATTGAATTGGTCAACGCGTTATAAGATCATTGAAGGCATTACAAGAGGGATGCTTTATCTTCATGAAGATTCTCGACTAAAAATCATACATCGTGATCTCAAAGCTAGTAATATATTGTTAGATGAAGATTTGAATCCAAAAATCTCTGATTTTGGTATGGCTAAAATTTTTGGAGTTGATCAAACGCAAGCAAGCACAAGTAGAGTTGTCGGCACCTTTGGATACATGGCTCCAGAGTATGCAATGCATGGTCATATTTCAATCAAATCTGATATATATAGTTTTGGTGTCCTAATTTTGGAGATTATTAGCGGCAAGAAGAATACATCTTTCTATATTTCAAGCTATGCTGAAGACCTACTAAGCTATGCCTGGAGGCTGTGGAGGGAAGGGAGGCCATTGGAATTGCTGGATCCTAGTTTAAGAGATTCTTGTTCAAGAAATGAAGTTACTAAATGCATCCATATAAGCTTGTTATGTATTCAGGAAAACCCAGCTCTGAGACCCACTATACAGTCTATTATGGTGATGCTAAGCAGTCACTCCGTCACATTGTCGCATCCTCGGAAACCAGCCTTTTTTGTTGGTCGCCATAGAACAGATTCAAACAATCCAACCATTTATGAAAATAGTTCAGATCAAGCTACCAGCAACTCTGCGCAGTGGTCTGTGGATAAAGATCCGATTAGTGATTTGTACCCTCGTTAG 1881 0.4253 MRIVKGVNRLSACGLKLIITPPPLSQQVEVDERIKGLTYVCSPKTYAQKSTFQTNLNHLLSSLSSNSNQSDGFYNTTVAGQGNNSNDTVYGMFQCYGDATVQACQKCVSNASKDILQRCPNNTGAVGWYDKCWLHYSDQYLFSKTDEYPRLVYYNVNNATDTTGFMKLVGETLSGVAKKASEGGSKKFATKTVDYDAFQTLYTMAQCTSDLSEIDCRTCLSNSISNLPICCNGRVGGVTVTPSCFLRYETYPFYQETAPPPALPPPAPWPESTSKVDISSVESLKFDLDTIRTATNDFSPDNKLGQGGFGEVYKGVLPGGQELAIKRLSSGSKQGVGEFKNEVVTMAKLQHRNLVRLLGFCLDEEEKILIYEFLPNRSLDNFLFGLENQGKLNWSTRYKIIEGITRGMLYLHEDSRLKIIHRDLKASNILLDEDLNPKISDFGMAKIFGVDQTQASTSRVVGTFGYMAPEYAMHGHISIKSDIYSFGVLILEIISGKKNTSFYISSYAEDLLSYAWRLWREGRPLELLDPSLRDSCSRNEVTKCIHISLLCIQENPALRPTIQSIMVMLSSHSVTLSHPRKPAFFVGRHRTDSNNPTIYENSSDQATSNSAQWSVDKDPISDLYPR 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4886g00008 626 CDD STKc_IRAK 304 569 - -
Pral4886g00008 626 FunFam Cysteine-rich receptor-like protein kinase 25 149 253 - -
Pral4886g00008 626 FunFam Cysteine-rich receptor-like protein kinase 10 267 373 - -
Pral4886g00008 626 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 44 614 - -
Pral4886g00008 626 ProSiteProfiles Protein kinase domain profile. 298 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4886g00008 626 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Pral4886g00008 626 SUPERFAMILY Protein kinase-like (PK-like) 284 593 IPR011009 -
Pral4886g00008 626 Gene3D Transferase(Phosphotransferase) domain 1 374 581 - -
Pral4886g00008 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Pral4886g00008 626 MobiDBLite consensus disorder prediction 595 626 - -
Pral4886g00008 626 MobiDBLite consensus disorder prediction 595 616 - -
Pral4886g00008 626 Gene3D - 150 253 IPR038408 -
Pral4886g00008 626 Gene3D - 34 140 IPR038408 -
Pral4886g00008 626 ProSiteProfiles Gnk2-homologous domain profile. 147 253 IPR002902 -
Pral4886g00008 626 SMART serkin_6 298 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4886g00008 626 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 35 141 - -
Pral4886g00008 626 Gene3D Phosphorylase Kinase; domain 1 269 373 - -
Pral4886g00008 626 Pfam Protein tyrosine and serine/threonine kinase 301 568 IPR001245 GO:0004672|GO:0006468
Pral4886g00008 626 FunFam cysteine-rich receptor-like protein kinase 10 374 576 - -
Pral4886g00008 626 Pfam Salt stress response/antifungal 157 251 IPR002902 -
Pral4886g00008 626 Pfam Salt stress response/antifungal 41 138 IPR002902 -
Pral4886g00008 626 ProSiteProfiles Gnk2-homologous domain profile. 34 141 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4886g00008 Pral-Chr4886 69818 73849 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4886g00008 37 626 Receptor kinase-like Gene Family AT4G05200 47.766 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4886g00008 PK_Tyr_Ser-Thr 3.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4886g00008 - - csin:114306417 656.366