Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4886g00005 ATGGATTCTATTAAGGCGTTCCTGCTCCTTGCTCTTCTAATCTTTTTCATTGCTAGAATCAAAGCACAGGAACCAGAGGTGGATTGTTCGGGCCCTACTTATGCCCCAAACAGCACATATCACTCAAATCTCAATCTGCTGCTTTCGACTCTTTCCTCAAACGCCAATAGCATTGGTGGCTTTTACAACACCACCGTCGGACAAAACGACGACGCCGTCTACGGTCTCTACCTCTGCCGCGGAGACACCACCGTCTCCGCCTGTCAAGCATGTGTTTCCCGGGCAACCAAAGATATCACGCAATGCCTCAATTATACCCAAGCCGTGGGTTGGTACGACAAGTGCATGTTACGATACTCCGACGCCGATTTCTTCTCCATAGAGCAAGATGATCCCACTCGCGTCCTCTTCAACAACGGCAACGCAACAGATCCCAAAAGCTTTATGCAACTGGTGATCGATACCATGAATGCAGTGGCCAGAGAAGCGGCGTACCGCGGCGGCGGGGGTAGCAAGAAATTTGCAACGAAAGAAAAAAACTACAGTTCTTTTCAAACTCTGTACACTATGGCGCAGTGCACACCGGATATATCTAGAGATGACTGTTATAACTGTCTGAGAAGAACAATCGGAGAGTATCCGAATTGCTGTTTTGGGAGGTTAGGGGCAATCGCACGCGCCTTCAGTTGCAACGTAAGGTACGAATTGTACCCCTTTTATGGAGTGATTTCGTCGCTTCCTTCCCCTCGTGTGCCAGAGTCAGCCTTCACTTCCAATGATAAAGGCAAGCTTTCGGCTAGGACAATTATCGCCATAGTAGTTCAAACAGCGATAGTCATATTGCAAGCCTCGTTCTGCTTCTTGTGCCTTCGGTGGCGGAGAGCAAGGAAGAATGCTTCAGTTCCTAAAACAGGTGAGACTTCAAGTGTAGAGTCTCTACAGTTTGATTTGGATACCATCAAATCAGCCACAGACGACTTCTCCCCCGACAATAAACTAGGCCAAGGTGGGTATGGCGAGGTGTACAAGGGCATTTTACCCGGTGGACAAGAGTTAGCTGTGAAGAGATTATCAAGTAGTTCCAAACAAGGTGTACTAGAATTTAAGAATGAAGTAGTTACAATGGCAAAACTACACCATAGAAATCTTGTGAGGTTTCTCGGATTTTGTTTGGATGAAGAAGAAAAGATACTCATATATGAATTTTTGCCCAACAAAAGCTTGGATAATTTTTTGTTTGGACTTGAAAACAAAACTAAATTGAATTGGTCAAATCGATACAAGATTATTGAAGGCATTGCAAGGGGAATACTTTATCTTCACGAAGATTCTCAATTGAAAATTATACATCGTGATCTCAAATCTAGCAATATATTGTTGGATGAGGATTTGAATCCAAAAATATCTGATTTCGGTATGGCTCGAATTTTTGGAACTGATCAAACTCAAGCCAGCACAAGTAAAGTTGTCGGCACATTTGGCTACATCGCTCCTGAATACGCAATGCATGGTCATATTTCAGTCAAATGTGATATATATAGTTTTGGCATCCTAATTCTGGAGATCATTAGTGGCAAGAAGAATACATCTTTCCATGCATCAAATTATGCTGAAAACTTGCCAACCTATGCCTGGAAACTCTGGAAGGAAGGGAAACCATTAGAATTGCTGGACCCTAGTGTAAGACATTCTTGTTCAAGCAATGAAGTTATTAAATGCATCCATATAAGCTTTTTGTGTATCCAGGAAAATCCAGCTCTAAGACCTGCAATACAATTTATTATGGTGATGCTAAACAGTCATTCCGTCACCCTGCCAGATCCTCAAGAGCCAGCATTTTTATTTGATCGCCATAGAACAGATTCAAACAACAGTCTAGCAATTTCCGAGGATAGCTCGGATCAATCTAAAAATAAGTCTTTGCAACGGTCTGTGGATGAAGATCCAATTTCAGACATGTATCCTCGTTAG 1971 0.4292 MDSIKAFLLLALLIFFIARIKAQEPEVDCSGPTYAPNSTYHSNLNLLLSTLSSNANSIGGFYNTTVGQNDDAVYGLYLCRGDTTVSACQACVSRATKDITQCLNYTQAVGWYDKCMLRYSDADFFSIEQDDPTRVLFNNGNATDPKSFMQLVIDTMNAVAREAAYRGGGGSKKFATKEKNYSSFQTLYTMAQCTPDISRDDCYNCLRRTIGEYPNCCFGRLGAIARAFSCNVRYELYPFYGVISSLPSPRVPESAFTSNDKGKLSARTIIAIVVQTAIVILQASFCFLCLRWRRARKNASVPKTGETSSVESLQFDLDTIKSATDDFSPDNKLGQGGYGEVYKGILPGGQELAVKRLSSSSKQGVLEFKNEVVTMAKLHHRNLVRFLGFCLDEEEKILIYEFLPNKSLDNFLFGLENKTKLNWSNRYKIIEGIARGILYLHEDSQLKIIHRDLKSSNILLDEDLNPKISDFGMARIFGTDQTQASTSKVVGTFGYIAPEYAMHGHISVKCDIYSFGILILEIISGKKNTSFHASNYAENLPTYAWKLWKEGKPLELLDPSVRHSCSSNEVIKCIHISFLCIQENPALRPAIQFIMVMLNSHSVTLPDPQEPAFLFDRHRTDSNNSLAISEDSSDQSKNKSLQRSVDEDPISDMYPR 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4886g00005 656 SUPERFAMILY Protein kinase-like (PK-like) 310 598 IPR011009 -
Pral4886g00005 656 ProSiteProfiles Protein kinase domain profile. 327 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4886g00005 656 ProSiteProfiles Gnk2-homologous domain profile. 22 124 IPR002902 -
Pral4886g00005 656 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 23 124 - -
Pral4886g00005 656 SMART serkin_6 327 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4886g00005 656 Pfam Salt stress response/antifungal 29 121 IPR002902 -
Pral4886g00005 656 Pfam Salt stress response/antifungal 140 237 IPR002902 -
Pral4886g00005 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Pral4886g00005 656 MobiDBLite consensus disorder prediction 636 650 - -
Pral4886g00005 656 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 640 - -
Pral4886g00005 656 Gene3D Transferase(Phosphotransferase) domain 1 403 607 - -
Pral4886g00005 656 Gene3D - 132 239 IPR038408 -
Pral4886g00005 656 Gene3D - 25 124 IPR038408 -
Pral4886g00005 656 CDD STKc_IRAK 333 599 - -
Pral4886g00005 656 ProSiteProfiles Gnk2-homologous domain profile. 130 239 IPR002902 -
Pral4886g00005 656 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Pral4886g00005 656 FunFam Cysteine-rich receptor-like protein kinase 25 132 239 - -
Pral4886g00005 656 MobiDBLite consensus disorder prediction 624 656 - -
Pral4886g00005 656 Pfam Protein tyrosine and serine/threonine kinase 330 595 IPR001245 GO:0004672|GO:0006468
Pral4886g00005 656 FunFam Cysteine-rich receptor-like protein kinase 10 291 402 - -
Pral4886g00005 656 FunFam cysteine-rich receptor-like protein kinase 10 403 605 - -
Pral4886g00005 656 Gene3D Phosphorylase Kinase; domain 1 290 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4886g00005 Pral-Chr4886 40619 44581 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4886g00005 9 656 Receptor kinase-like Gene Family AT4G05200 46.418 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4886g00005 Pkinase 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4886g00005 - - csin:114306417 666.766