Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4886g00003 ATGAAGCTCTACAAAATTGATCCTCCTCCTCTCTCTGTTCTCATGCTCTTCATGGCGATCCTGACAGTGATAGTAACCAGTTATAGAGCATCCGCCCAAACAGAGGAATATTACAACTGTCGAAACACTACATTTTTCTCTTCCAATAGTTCCTATCAAACCAATCTGGACCATCTCCTTTCATGGCTTTCCACAAATTCCACCCGCCAAAACGGTTTCTACTATGCCGCCGCCGGCAACTCCGATAGCACTGTCTACGGCGCCTTCCTCTGCCGTGGCGATCTCACCCCCGATGCCTGCCATGACTGCGCTTCCGTAGCGGCCAAACAAATACTCCGAAGGTGTCCTTTAGATAAAAAGTCAGTGATCTGGTTCAACGAGTGTATGTTACGTTACTCAGATGAGCCTTTCTCCTCCGTCAGTGAAGAAGCCCCCAGGCTTATTTTGATGAATACTGCGGCAAGCTTAAACCAGAGTAGCTTCATGTCACTGTTGGCTGAGACTATCAACGCGGCGGAGACGCAAGCCGTAAAGGGCGGGGCTGACAAGAAGTTTGCTACAAAAGAAGCCAAATTTTCTACTTTTCAAACGCTGTATACGCTAGCACAGTGCACGCCGGACTTAACGGAAACTACCTGCGAAACATGCTTAAAACGAGCAAGTTCGACCTTACCCAGTTGCTGCAATGGAAAAATAGGGGCCAGAGTCCTGCAAACTAGTTGTATTGTCCGATATGAAACGTACCCGTTCTACCAATCATCGCCGGTGATCACCCCGCGAGAACCAACGCCAAAAGGTGTTTCAGGAAAAACCCGGATCTCTGTGGCCGTAGTCCTCGCGATTGTGGCTCCAATTACGACTGTTTTGCTGCTTTTCCTCCTTCTCTGCTGGTTAGGAACTAGAAGGGCAAGCAAGAAGCACATATTAGTGCCGCCAGCTGAAGAAAACGATGTTGAAATTTCCAGTGTGGAGCACGTGCAGTTTGATCTGGAAACAGTCAGATTGGCCACAAACAACTTCTCCCATGAAAATAAACTAGGCGAAGGAGGATTTGGTGAGGTTTTCAAGGGATCTCTTCCTAATGGGCAAGATATTGCAGTGAAGAGGCTTTCATTAAGCTCCAGGCAAGGTGCAGAAGAATTCAAGAATGAGGTGGTCTTAGTGGCCAACCTTCAACACAGAAACCTTGTTAGGCTATTGGGGTTTTGCTTGGATGGAGAAGAGAAGATCCTCATATATGAGTTCATTCCCAACAAGAGCTTGGATCATTTTCTTTTCAATGATGAAAGAAAAAGTATGCTCAATTGGCCAAAACGATACAAGATCATACAAGGAATTGCTCGCGGAATACTTTACCTTCATGAAGACTCTCGACTTAGAATCATACACCGTGATCTTAAAGCTAGTAATATATTATTAGATGAGAATTTGAATGCAAAAATTGCAGATTTTGGTATGGCAAAAATTTTTGGTGCTGATCAAACTCAAGGAAATACAAATAGAATTGTGGGAACATTTGGTTATATGTCTCCGGAGTATGCAATGCATGGGAATCTGTCTGTAAAAGTGGATGTATATAGCTTTGGCCTGTTGATTTTGGAAATAATAAGCGGACAAAAGAGCACATCCTTTCAAGAATCCAACTACGATGAACATCTCCTGAACTATGCCTGGAGGAAATGGAAAGATGGGACGCCGTTGGAAGTGTTAGACGTGAGTTTGAGAGATTCTTATAATAGAGAGGAAGTGAGAAGATGCATCCAGATTGCATTAACATGTGTACAAGAAGATCCAGCTCAAAGGCCAACAATGCAGACAATAGTTCTGATGCTCAATAGTTACTCAGTTAGCGTAGCAATACCTGAGAGACCTCCATTTTTGGTTCAAAGCAGAACCGTTGAGCTCAGCCTTCCATCGAACTCCACAGATAAGTCTTCTCAAAGCAGATCAGCCCCATACTCTGTTGACGAAGCTTCCATCACTCAAGTGTACCCTCGATAG 2001 0.4448 MKLYKIDPPPLSVLMLFMAILTVIVTSYRASAQTEEYYNCRNTTFFSSNSSYQTNLDHLLSWLSTNSTRQNGFYYAAAGNSDSTVYGAFLCRGDLTPDACHDCASVAAKQILRRCPLDKKSVIWFNECMLRYSDEPFSSVSEEAPRLILMNTAASLNQSSFMSLLAETINAAETQAVKGGADKKFATKEAKFSTFQTLYTLAQCTPDLTETTCETCLKRASSTLPSCCNGKIGARVLQTSCIVRYETYPFYQSSPVITPREPTPKGVSGKTRISVAVVLAIVAPITTVLLLFLLLCWLGTRRASKKHILVPPAEENDVEISSVEHVQFDLETVRLATNNFSHENKLGEGGFGEVFKGSLPNGQDIAVKRLSLSSRQGAEEFKNEVVLVANLQHRNLVRLLGFCLDGEEKILIYEFIPNKSLDHFLFNDERKSMLNWPKRYKIIQGIARGILYLHEDSRLRIIHRDLKASNILLDENLNAKIADFGMAKIFGADQTQGNTNRIVGTFGYMSPEYAMHGNLSVKVDVYSFGLLILEIISGQKSTSFQESNYDEHLLNYAWRKWKDGTPLEVLDVSLRDSYNREEVRRCIQIALTCVQEDPAQRPTMQTIVLMLNSYSVSVAIPERPPFLVQSRTVELSLPSNSTDKSSQSRSAPYSVDEASITQVYPR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4886g00003 666 MobiDBLite consensus disorder prediction 637 657 - -
Pral4886g00003 666 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Pral4886g00003 666 Gene3D Transferase(Phosphotransferase) domain 1 416 620 - -
Pral4886g00003 666 Pfam Salt stress response/antifungal 157 248 IPR002902 -
Pral4886g00003 666 Pfam Salt stress response/antifungal 40 134 IPR002902 -
Pral4886g00003 666 SUPERFAMILY Protein kinase-like (PK-like) 325 643 IPR011009 -
Pral4886g00003 666 MobiDBLite consensus disorder prediction 637 666 - -
Pral4886g00003 666 CDD STKc_IRAK 346 612 - -
Pral4886g00003 666 ProSiteProfiles Gnk2-homologous domain profile. 143 250 IPR002902 -
Pral4886g00003 666 Gene3D - 33 137 IPR038408 -
Pral4886g00003 666 Gene3D - 146 250 IPR038408 -
Pral4886g00003 666 Gene3D Phosphorylase Kinase; domain 1 302 415 - -
Pral4886g00003 666 FunFam Cysteine-rich receptor-like protein kinase 10 301 415 - -
Pral4886g00003 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Pral4886g00003 666 ProSiteProfiles Protein kinase domain profile. 340 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4886g00003 666 Pfam Protein tyrosine and serine/threonine kinase 342 610 IPR001245 GO:0004672|GO:0006468
Pral4886g00003 666 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 33 137 - -
Pral4886g00003 666 ProSiteProfiles Gnk2-homologous domain profile. 34 137 IPR002902 -
Pral4886g00003 666 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 662 - -
Pral4886g00003 666 FunFam Cysteine-rich receptor-like protein kinase 25 145 250 - -
Pral4886g00003 666 SMART serkin_6 340 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4886g00003 666 FunFam cysteine-rich receptor-like protein kinase 10 416 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4886g00003 Pral-Chr4886 9690 12657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4886g00003 14 666 Receptor kinase-like Gene Family AT4G05200 50.442 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4886g00003 PK_Tyr_Ser-Thr 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4886g00003 - - cit:127900229 732.25