Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4886g00002 ATGTGCCAAAAGTGCGTTCAGTTGGCAATCCAGAAAATCGCGTCGCGCTGTTTGTACTCCAAGGAAGCCATCATCTGGTATCGCGAGTGCTTAGTTCGGTATTCGAGCCGTTCCATCTTCTCCAACTTGGAGGAATGGCCCAGGATTAAGCTCGGGAATTTCAGCACGATTCCGGACACGTCGAATCAAGGTGGCGTCGGGTGGGTGCTGGCGAACACGCTGAACGAGGCGATAACGGAGGCGGCGGACGGTGTGGCAGCTGGAGAAAAGAAATTTGCGACGAGGACGGGGAAAGTGAGGGATCAGAAGGTGTGCACTCTGGTTCAATGCTCGCACGATTTGACGAGCGGAGATTGCCGGGGATGTCTGAGGGATATGATGGCGGATATTCCGCTGTGTTGCCTTGGAAGATACGCCGGAATGGTTCTGTATCCAAGCTGCAGCCTCATGTTTGGGTTGCGACTCTTTTACAGAGAGGTTGAAGCTGTTCGCGCGCGTTCGCCTGAGCGCGTCTCACATGATTCTGTTTCTGTTGATGGCGGCAAAGGGGGCTCAGCGTCCGAAGGAGGCAGAAAAGTCCGGTCACGGATCATTATCGCGGTGGTCATCCCAGTCGTTATTACAGCCCTGCTGTCCTATTTCGTCATCTATTTGCTGCGAAGGAAGGCAAGGAGGAGATATGCCATTCTCAAAGAAAACTTTGGAACTGAATGTACTACTCTGGAGTCACTGCGATTCGATTTCGCTACAATTGAAGCTGCAACAAACAGGTTTTCAGATCAGAACAGGATAGCTCAAGGAGGATTTGGAGAAGTTTACGAGGGTACTCTTTCTAATGGACAGAAAATTGCTGTGAAGAGACTCTCCACGAGCTCCGAACAAGGCACCCTGGAATTTAAGAATGAGATTTTACTAACAGCTAAACTTCAACATAGAAATCTAGTGACATTGTTGGGATTTTGCTTACAAGAGCATGAGAAGATACTCGTCTACAAATTTGCACCCAACAAAAGCCTCGACTACTTTCTCTTTGGTTTGATTCTCAAGATCAACTCTTGTCAAATTAGTCCAGGTGCTTTAAAATCATTGAAGGGGTTGTCGAGCAATTTTTATCTTCATGAGCATTCACGTCTTAAAATTATACATCGTGATCTTAAACCTAGCAATATCTTATGA 1176 0.4745 MCQKCVQLAIQKIASRCLYSKEAIIWYRECLVRYSSRSIFSNLEEWPRIKLGNFSTIPDTSNQGGVGWVLANTLNEAITEAADGVAAGEKKFATRTGKVRDQKVCTLVQCSHDLTSGDCRGCLRDMMADIPLCCLGRYAGMVLYPSCSLMFGLRLFYREVEAVRARSPERVSHDSVSVDGGKGGSASEGGRKVRSRIIIAVVIPVVITALLSYFVIYLLRRKARRRYAILKENFGTECTTLESLRFDFATIEAATNRFSDQNRIAQGGFGEVYEGTLSNGQKIAVKRLSTSSEQGTLEFKNEILLTAKLQHRNLVTLLGFCLQEHEKILVYKFAPNKSLDYFLFGLILKINSCQISPGALKSLKGLSSNFYLHEHSRLKIIHRDLKPSNIL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4886g00002 391 Gene3D Phosphorylase Kinase; domain 1 221 333 - -
Pral4886g00002 391 ProSiteProfiles Gnk2-homologous domain profile. 51 156 IPR002902 -
Pral4886g00002 391 Pfam Salt stress response/antifungal 74 151 IPR002902 -
Pral4886g00002 391 SMART tyrkin_6 258 391 IPR020635 GO:0004713|GO:0006468
Pral4886g00002 391 ProSiteProfiles Gnk2-homologous domain profile. 1 39 IPR002902 -
Pral4886g00002 391 Gene3D - 1 38 IPR038408 -
Pral4886g00002 391 Gene3D - 60 156 IPR038408 -
Pral4886g00002 391 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 92 391 - -
Pral4886g00002 391 Gene3D Transferase(Phosphotransferase) domain 1 335 391 - -
Pral4886g00002 391 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 219 333 - -
Pral4886g00002 391 Pfam Protein kinase domain 259 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4886g00002 391 SUPERFAMILY Protein kinase-like (PK-like) 239 391 IPR011009 -
Pral4886g00002 391 ProSiteProfiles Protein kinase domain profile. 258 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4886g00002 Pral-Chr4886 6384 8720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4886g00002 1 391 Receptor kinase-like Gene Family AT4G05200 40.909 7.27e-84 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4886g00002 Pkinase 3.7e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4886g00002 - - lang:109335395 407.527