Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4885g00004 ATGCCTTCCCACAAAATTATGTTACTCTTTTTCTTTATTAGCTTTCTTTATTCTGCTACTACTCAAGCACAACCCTCTTATACTAACAGCAGCTGTTCTCCTGACACCTTCGCTGCCAATAGTTCCTTCCAATCCGACCTCACCAAGCTCCTCTCTTCCTTAGCTTCCAACAAAACCGCCAACATCAATTTCTACAACACCACCGTCCACGGCGGTCGCAACACCGTATACGGCCTCTTCATGTGCCGGGGTGACGTCACCCTCCAGTTGTGCCACCAGTGCGTCGTTGACGCAACCAAAAACATACGTTCCCTGTGCAACGTCTCGAAGGAGGCCGTGATATGGTACGAGGAGTGTATGGTTCGCTATTCCGACCGCTACTTCTTTTCCTCCGTCAACACGAGTCCTAGTCGGTGCGGGGCCAACACCAACAACGTCGCCAACAACCAAACAGGATTCATTAATGTATTGAACACAACAATGAACAAGGCTGCCGACGAGGCGGCGAAACCTGGTATGGGGAAGAATTTTGCGACAGAAGAAGCGAGTTTACAGTTTCAAACTTTGTATTGTCTGGTTCAGTGCACGCCGGACCTTTCTCCCCAAGGTTGCAGAACATGTCTGAGAGACGCGATTGGGGACCTTTTCAACTGTAGTGACAGGAAGATAGGAGGAAGAGTTCTATATCCCAGCTGTAACGTTCGTTATGAATTGTTCATCTTTTATAATTCTAGTGGTAAGCCAGCACCGCCGCCTCTTCCTGCACCTTTTCCGGCAACTCATATAGGAAAAACGAGGACCATTGTAATAGCTGTTGCTTCTGTTGCTTGTGCGGGGTTACTTTTTTGTTTGGTGTACTATTTCTTAAGGAGTTTAATAAGGAAGAGACGCAGGGCTGACCTCAGACAAAAATACTTTGGAGAAGAAAGCAACACTTTAGAGCCTCTGCAATTTAGTTTGGCTACTATTGAAGCTGCAACAAATAGGTTTTCAGAGGAAAATTGTCTAGGCCAAGGTGGATTTGGACAGGTTTACAAGGGTATTCTTTCAAATGGTCAAGAAATAGCTGTAAAGAGACTTTCGAAAGGTTCAGGCCAAGGTGCAGCAGAATTTAAAAATGAAGTATTATTAATAGCCAGACTGCAGCACAGAAATTTGGTGACCTTACTGGGATTTTGCGTAGAAGATCAAGAGAAAATTCTCATTTATGAATATGTTCCCAATAAAAGCCTTGACTACTTCCTCTTTGGTTTGCTTCTTCTAAACTTTTTCATAATTTTTTTTATTGAAATTTAA 1296 0.4383 MPSHKIMLLFFFISFLYSATTQAQPSYTNSSCSPDTFAANSSFQSDLTKLLSSLASNKTANINFYNTTVHGGRNTVYGLFMCRGDVTLQLCHQCVVDATKNIRSLCNVSKEAVIWYEECMVRYSDRYFFSSVNTSPSRCGANTNNVANNQTGFINVLNTTMNKAADEAAKPGMGKNFATEEASLQFQTLYCLVQCTPDLSPQGCRTCLRDAIGDLFNCSDRKIGGRVLYPSCNVRYELFIFYNSSGKPAPPPLPAPFPATHIGKTRTIVIAVASVACAGLLFCLVYYFLRSLIRKRRRADLRQKYFGEESNTLEPLQFSLATIEAATNRFSEENCLGQGGFGQVYKGILSNGQEIAVKRLSKGSGQGAAEFKNEVLLIARLQHRNLVTLLGFCVEDQEKILIYEYVPNKSLDYFLFGLLLLNFFIIFFIEI 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4885g00004 431 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 25 127 - -
Pral4885g00004 431 SUPERFAMILY Protein kinase-like (PK-like) 308 422 IPR011009 -
Pral4885g00004 431 Pfam Protein tyrosine and serine/threonine kinase 333 415 IPR001245 GO:0004672|GO:0006468
Pral4885g00004 431 Gene3D Phosphorylase Kinase; domain 1 291 405 - -
Pral4885g00004 431 ProSiteProfiles Gnk2-homologous domain profile. 25 128 IPR002902 -
Pral4885g00004 431 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 9 252 - -
Pral4885g00004 431 Pfam Salt stress response/antifungal 139 237 IPR002902 -
Pral4885g00004 431 Pfam Salt stress response/antifungal 32 125 IPR002902 -
Pral4885g00004 431 Gene3D - 134 241 IPR038408 -
Pral4885g00004 431 Gene3D - 24 128 IPR038408 -
Pral4885g00004 431 ProSiteProfiles Gnk2-homologous domain profile. 134 241 IPR002902 -
Pral4885g00004 431 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Pral4885g00004 431 ProSiteProfiles Protein kinase domain profile. 330 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4885g00004 431 FunFam Cysteine-rich receptor-like protein kinase 25 136 241 - -
Pral4885g00004 431 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 294 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4885g00004 Pral-Chr4885 38408 40527 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4885g00004 9 416 Receptor kinase-like Gene Family AT4G05200 42.459 2.78e-104 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4885g00004 Stress-antifung 9.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4885g00004 - - pcin:129286093 607.446