Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4885g00002 ATGACCTTCAACACTATAATTTTGTCACTCTTCTTCTTCATCGGCTTCCTCCTCAATTCTTCTTCTGCTCAAGTCATAGGTCGTAATGAGCTTTACCCTCAGTGCTCCACCCGCGGTAATTTCACTGCCAATAGTACCTTCGACTCTAACCTCAAAACTTTCTTTTCTTCCTTAACTTCCAACAAAACCGCCAACCTCAAATTCTACAACACCACCGTTGGCCGCGGCGGGGAGACCGTATACGGCCTCTTCATGTGCCGGGGTGACGTCGACAACCAAGACGTATGCCGCCAGTGCGTAGCTGACTCAACCCTAGAGGTAGGTTCCGTGTGCCCATTTTCGAAGGAGGCCGTAACCTGGCGCGACCTGTGCTTGGTTCGCTATTCCGATCGCAACTTCTTCTCCACCGTCAATACGAGGCCTAGACTCCGAATGTTGAACCCTAACAATGTCTCGAATCAGGCAGGATTCATGAACGTATTGACGTTTATTATGAACCAGTCGGCGGATGAGGCTTCTAAGTCTGCTGTGATGAAGAAGAAGTTTAAGATGAATGCGGTGGCGGTAGAGTTTCAAACTCTGTACGTTCTGGTTCAGTGCACGCCGGACCTTTCGTCGGCGGATTGCAGAAGGTGTCTGAGCGGAGTGATTGGGGACTTTAGATGGTGTTGTGATGGGAAGATCGGAGGAAGAGTGGTATATCCAAGTTGCCTCGCTCGTTATGAGTTGTATCAGTTCTTTAATTCTTCTACGCCTGTTCCGCCAGTAACGCTGTCGCCTCCTCCGGCTCTACTTTCTCCTCCAAATCCTGTAAAAAGGAAAAGGCGATTGAGGACTATTTTGATAGCTGTGGCTTCTCCTGTTGGTGCTATGATACTTTTATGCTTCGCCTACTATTTATCAAAGAATCAGATAAAGAAGATACGTATGGCTTTTCTCATGCGAAAGTACTTTGGAAGCGAAAGCAACACTTTAGAGCCTCTGCAATTCAGTTTGGCTACGATTGAAGCAGCGACAAATAAGTTTTCAAAGCAAACTAGTTTAGGTCGGGGTGGATTTGGACAAGTTTACAAGGGCATTCTTTCAAATGGCCAAGAGATAGCGGTAAAAAGACTTTCGAAAAGTTCTGGCCAAGGAGCAGAAGAATTTAAGAATGAAGTTTTGCTAATAGCCACGCTCCAGCATAGAAATCTGGTGGCCTTGCTGGGATTTTGCATAGAAGAGCAAGAGAAAATTCTCATTTATGAATATGTTCCCAACAGAAGTCTTGATTACTTCCTGTTTGGTTCTGAAGAAAGCAAAGTGTTAAATTGGGAGGAACGTCACAAAATTATTGGAGGAGTTGCTAGAGGAATTCTTTACCTTCATGACTATTCTCGAGTCAAAATTATACATCGTGATCTAAAACCCAGTAATATTTTGCTAGATGATGAAATGAATCCAAAAATTTCAGATTTTGGCATGGCTAGGATGGTTGGATTCAATGACATCAAAGGAAGTACAAATAAAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGTTTGGACAATATTCTGAAAAATCAGATGCTTTTAGCTTTGGAGTGATAGTATTAGAAATTATTAGTGGAAAGAAGATCACAAGTTCTCCTGATCAATCTCATGGCCTCCTAAACTATGCTTGGAATCAATGGAAGGAAGAAAAGATCTTAGAGATACTGGATTCAAATCTAAATGAACCTGAATCGTTGAATGAAGTGAACAAGTGTATCCAAATCGGGTTGTTATGTGTTCAAGAAAATCCAGAAGCAAGGCCTTCTATGGCTACAGTTGTTTCATATCTTAGCAATGATTCAATTCAATTGCCATTTCCCCAAGAACCTGCTTTCTTTCTGGAGGGCCAAACGGAGCTTAATACCGACAGTAAAGAATCAATTAATGAAATGTCTATAAGTGAATTCTATCCTCGGTAG 1962 0.4235 MTFNTIILSLFFFIGFLLNSSSAQVIGRNELYPQCSTRGNFTANSTFDSNLKTFFSSLTSNKTANLKFYNTTVGRGGETVYGLFMCRGDVDNQDVCRQCVADSTLEVGSVCPFSKEAVTWRDLCLVRYSDRNFFSTVNTRPRLRMLNPNNVSNQAGFMNVLTFIMNQSADEASKSAVMKKKFKMNAVAVEFQTLYVLVQCTPDLSSADCRRCLSGVIGDFRWCCDGKIGGRVVYPSCLARYELYQFFNSSTPVPPVTLSPPPALLSPPNPVKRKRRLRTILIAVASPVGAMILLCFAYYLSKNQIKKIRMAFLMRKYFGSESNTLEPLQFSLATIEAATNKFSKQTSLGRGGFGQVYKGILSNGQEIAVKRLSKSSGQGAEEFKNEVLLIATLQHRNLVALLGFCIEEQEKILIYEYVPNRSLDYFLFGSEESKVLNWEERHKIIGGVARGILYLHDYSRVKIIHRDLKPSNILLDDEMNPKISDFGMARMVGFNDIKGSTNKIVGTYGYMSPEYAMFGQYSEKSDAFSFGVIVLEIISGKKITSSPDQSHGLLNYAWNQWKEEKILEILDSNLNEPESLNEVNKCIQIGLLCVQENPEARPSMATVVSYLSNDSIQLPFPQEPAFFLEGQTELNTDSKESINEMSISEFYPR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4885g00002 653 CDD STKc_IRAK 348 611 - -
Pral4885g00002 653 Gene3D Transferase(Phosphotransferase) domain 1 418 618 - -
Pral4885g00002 653 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 649 - -
Pral4885g00002 653 SUPERFAMILY Protein kinase-like (PK-like) 325 634 IPR011009 -
Pral4885g00002 653 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 133 - -
Pral4885g00002 653 Pfam Protein kinase domain 343 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4885g00002 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Pral4885g00002 653 ProSiteProfiles Protein kinase domain profile. 342 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4885g00002 653 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 418 619 - -
Pral4885g00002 653 Gene3D Phosphorylase Kinase; domain 1 304 417 - -
Pral4885g00002 653 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 305 417 - -
Pral4885g00002 653 SMART serkin_6 342 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4885g00002 653 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Pral4885g00002 653 Pfam Salt stress response/antifungal 152 244 IPR002902 -
Pral4885g00002 653 FunFam Cysteine-rich receptor-like protein kinase 25 141 246 - -
Pral4885g00002 653 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Pral4885g00002 653 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Pral4885g00002 653 ProSiteProfiles Gnk2-homologous domain profile. 139 246 IPR002902 -
Pral4885g00002 653 Gene3D - 28 133 IPR038408 -
Pral4885g00002 653 Gene3D - 140 246 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4885g00002 Pral-Chr4885 26710 31730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4885g00002 31 653 Receptor kinase-like Gene Family AT4G05200 44.801 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4885g00002 Pkinase 2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4885g00002 - - pcin:129286093 1020.76