Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4884g00030 ATGAAGAAGAAGTTTGAGACGAATGCGGTGCGGTACAGTTTCAAAACTCTGTACGTTCTGGTTCAGTGCACGCCGGACCTTTCGTCGGCGGATTGCAGAAGGTGTCTGAGCGGAGTGATTGGGGACTTTAGATGGTGTTGTGATGGGAAGATCGGAGGAAGAGTGCTATATCCAAGTTGCCTCGCCCGTTATGAGTTGTATCAGTTCTTTAATTCTTCAACGCCTCTTCGGCCAGTAACGCTGTCGCCTCCTCCGGCTCTACTTTCTCCTCCAAATCCTGTAAAAAGGAAAAGGCGATTGAGGACTATTTTGATAGCTGTGGCTTCTCCTGTTGGTGCTATGATACTTTTATGCTTCGCCTACTATTTATCAAAGAATCAGATAAAGAAGATACGTATGGCTTTTCTCATGCGAAAATACTTTGGAAGCGAAAGCAACACTTTAGAGCCTCTGCAATTCAGTTTGGCTACGATTGAAGCAGCGACAAATAAGTTTTCGAAGGAAACTAGTTTAGGTCGGGGTGGATTTGGACAAGTTTACAAGGGCATTCTTTCAAATGGTCAAGAGATAGCTGTAAAAAGACTTTCGAAAAGTTCTGGCCAAGGAGCAGAAGAATTCAAGAATGAAGTTTTGCTAATAGCCACGCTCCAGCATAGAAATTTGGTGGCCTTGCTAGGATTTTGCATAGAAGAGCAAGAGAAAATTCTCATTTATGAATATGTTCCCAACAAAAGTCTTGATTACTTCCTGTTTGGTTCTCAAGAAAGCAAAGTGTTAAATTGGGAGGAACGTCACAAAATTATCGGAGGAGTTGCTAGAGGAATTCTTTACCTTCATGACTATTCTCGGGTTAAAATTATACATCGTGATCTCAAACCGAGTAATATTTTGTTAGATGATGAAATGAATCCAAAAATTTCAGATTTTGGCATGGCTAGGATGGTTGGATTCAATGAAATTGAAGGAAGTACAAAAAAAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGTTTGGACAATATTCTGAAAAATCAGATATTTTTAGTTTTGGAGTGATAGTATTAGAAATTATTAGCGGAAAGAAGATCACAAGTTCTCCGGCTCAATCTCATGGCCTCCTAAACTATGCTTGGAATCAATGGAAGGAAGAAAAGATCTTAGAGATACTGGATTCAAATCTAAATGAATCTGAATCGTTGAATGAAGTGGACAAGTGCATCCAAATCGGGTTGTTATGTGTTCAAGAAAATCCAGAAGCAAGGCCTTCTATGGCTACAGTTGTTTCATATCTTAGCAATGATTCAATTCAATTGCCATTTCCACAAGAACCTGCTTTCTTTCTGGAGGGCCACATGGAGCATAGCACCGAAAGCCGAGGATCCATTAATGAAGTATCTATAAGTGACTTCTATCCTCGGTAG 1431 0.3997 MKKKFETNAVRYSFKTLYVLVQCTPDLSSADCRRCLSGVIGDFRWCCDGKIGGRVLYPSCLARYELYQFFNSSTPLRPVTLSPPPALLSPPNPVKRKRRLRTILIAVASPVGAMILLCFAYYLSKNQIKKIRMAFLMRKYFGSESNTLEPLQFSLATIEAATNKFSKETSLGRGGFGQVYKGILSNGQEIAVKRLSKSSGQGAEEFKNEVLLIATLQHRNLVALLGFCIEEQEKILIYEYVPNKSLDYFLFGSQESKVLNWEERHKIIGGVARGILYLHDYSRVKIIHRDLKPSNILLDDEMNPKISDFGMARMVGFNEIEGSTKKIVGTYGYMSPEYAMFGQYSEKSDIFSFGVIVLEIISGKKITSSPAQSHGLLNYAWNQWKEEKILEILDSNLNESESLNEVDKCIQIGLLCVQENPEARPSMATVVSYLSNDSIQLPFPQEPAFFLEGHMEHSTESRGSINEVSISDFYPR 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4884g00030 476 Gene3D - 1 69 IPR038408 -
Pral4884g00030 476 Gene3D Transferase(Phosphotransferase) domain 1 241 441 - -
Pral4884g00030 476 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 14 471 - -
Pral4884g00030 476 ProSiteProfiles Gnk2-homologous domain profile. 1 69 IPR002902 -
Pral4884g00030 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
Pral4884g00030 476 Pfam Salt stress response/antifungal 15 67 IPR002902 -
Pral4884g00030 476 Pfam Protein kinase domain 166 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00030 476 ProSiteProfiles Protein kinase domain profile. 165 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00030 476 SMART serkin_6 165 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00030 476 CDD STKc_IRAK 171 434 - -
Pral4884g00030 476 SUPERFAMILY Protein kinase-like (PK-like) 148 458 IPR011009 -
Pral4884g00030 476 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 241 442 - -
Pral4884g00030 476 Gene3D Phosphorylase Kinase; domain 1 127 240 - -
Pral4884g00030 476 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 128 240 - -
Pral4884g00030 476 ProSitePatterns Protein kinases ATP-binding region signature. 171 193 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4884g00030 Pral-Chr4884 295753 298888 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4884g00030 3 476 Receptor kinase-like Gene Family AT4G05200 47.904 4.52e-156 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4884g00030 Pkinase 2.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4884g00030 - - pcin:129286093 787.334