Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4884g00029 ATGAATCCAAAAATTTCTGATTTTGGCCTGGCAAGAATGGTTGGTATTAATGAAACTAGAGGAAACACAAATAGAATTGTTGGAACATTAGGTTATATGTCTCCAGAATATATTAAGTTTGGACTATTTTTTGAGAAATCAGATGTTTTCAACTTTGGGGTGATGGTTTTAGAAATTATTAGTGGAAAGAAGAATATAAATTCTCGTCATGAATATCCTGATTCTCAGTATACTGATGGACTATTAAGTAATGCTTGGAAGCATTGGAGGGACGAAAAATTGATAGAGATGTTGGATCCAAGTCTGACAGAAGCTGGGTCACACAGTGAAATAATCAAATGCATCTATATCGGCTTGTTGTGTGTTCAAGGAAATCCAGAAGTTAGGCCTTCCATGAATGAAGTTGTTCAATATCTAAGTAATAATTCAATTCAATTACCAATTCCTCAAGAACCAGCATTCTTCATACACAGTCAAATGGAACAGTAG 489 0.3436 MNPKISDFGLARMVGINETRGNTNRIVGTLGYMSPEYIKFGLFFEKSDVFNFGVMVLEIISGKKNINSRHEYPDSQYTDGLLSNAWKHWRDEKLIEMLDPSLTEAGSHSEIIKCIYIGLLCVQGNPEVRPSMNEVVQYLSNNSIQLPIPQEPAFFIHSQMEQ 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4884g00029 162 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 157 - -
Pral4884g00029 162 Gene3D Transferase(Phosphotransferase) domain 1 1 147 - -
Pral4884g00029 162 ProSiteProfiles Protein kinase domain profile. 1 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00029 162 SUPERFAMILY Protein kinase-like (PK-like) 1 157 IPR011009 -
Pral4884g00029 162 Pfam Protein tyrosine and serine/threonine kinase 4 139 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4884g00029 Pral-Chr4884 294062 294903 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4884g00029 1 159 Receptor kinase-like Gene Family AT4G23150 50.314 1.27e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4884g00029 PK_Tyr_Ser-Thr 3.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4884g00029 - - pcin:129286968 238.039