Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4884g00026 ATGCCTTTCAACATCATAATTTTGTTACTCTTCTTCATCGGCTTCCTCCATTCTTCTTCTGCTCAAGTCATAGGTCGTAATTCTCTTCACCCTCAATGCTCCACCCACCACAATTTCACCGCCAATAGCACCTTCGACTTTAACCTCAACACCCTCTTTTCTTCCTTAACTTCCAACGAAACCGCCCACCTCGACTTCTACAACACCACCGTTGACGGCGGTGGCGAGACCATATACGGCCTCTTCATGTGCCGGGGTGACGTCAACCAAGACGCATGCCACCAGTGCGTCGTTGACTCAACGGCAGAGTTAGCTTACTATTGCAGATTTTCGAAGGCGGCCGTAAACTGGCTTGACCCGTGCTTGGTTCGCTATTCTCAGCACAACTTCTTCTCCACCGTCGATAGAAAGCCTAAACTGAAAATGTTGAACACTAACAATGTCTCGAACCAGGCAGGATTCATGAACGTATTGATGACTGTTATGAACCTGACGGCAGATGAAGCGGCGAAGCCTGCTTTGATGAAAAAGAAGTCGGCGACGAAAGCGGTGGTGGTAGATATTCAAACTCTGTATGTGATGGTTCAGTGCACGCCGGACCTTTCGCCGGGAGATTGCAGAACCTGTCTGCGTGGTGTGATCGGGAACCTTCCATGGTGTTGTGAGGGCAAGATCGGAGGAAGAGTGGCATATCCAAGTTGCTTCGCTCGCTATGAGCTGTATATGTTCTTTAATTCTTCTACGCCTCTCCGGCCAGTAAGGCTGCCCCCTCCGCCTCCGCCTCCTCCTCCGGCTCCATTAACTCCTCCAACTCCTTCAGATGGTAAGCTTAATGATCTAGCCAGGTTTATTTGTCTAGTTGGAAGCGAAAGCAACACTTTAGAGCCTCTGCAATTCAGTTTGGCTACGATTGAAGCCGCGACAAATAAGTTTTCACAGGAAAATTGTTTAGGTCAGGGTGGATTTGGACAAGTTTACAAGGGCATTCTTTCAAATGGTCAAGAAATAGCTGTAAAAAGACTTTCAAAAAGTTCTGGCCAGGGAGTAGAAGAATTTAAGAACGAGGTTTTATTAATAGCCAGACTCCAGCATAGAAATTTGGTGGCCTTGCTAGGATTTTGCATAGAAGGGCAAGAGAAAATTCTCATTTATGAATATGTTCCCAACAAAAGTCTTGATTATTTTCTATTTGGTTCTCAAAAAATCAAAGTACTAAATTGGGAGGAACGATGTAAAATTATAGGAGGAGTTGCTCGAGGAATTCTTTACCTTCATGATTATGCTCGAGTTAAGATTATACATCGTGATCTCAAGACAAGCAATATTTTGTTAGATAATGAAATGAACCCAAAAATTTCAGATTTTGGCATGGCCAAGATGGTTGGAATCCATGAAATTGAGGAAAGTACGAGTAACATTGTTGGAACCTATGGTTATATGTCTCCGGAATATGCAATGTTTGGACAATATTCTGAAAAATCAGATGTTTTTAGCTTTGGAGTAATAGTATTAGAAATGATCAGTGGAAGGAAGATCACAAGCTCTCAAGATCAATCTCATGGCCTCCTAAACTATGCTTGGAATCAATGGAAGGAAGAAAAGATATTAGATGTATTGGATTCAAGTCTAAATGAACCTGAATCGTTGAATGAAGTGGACAAGTGCATCCAAATCGGGTTGTTATGTGTTCAAGAAAATCCGGAAGCAAGGCCTTCTATGGCTACAGTTGTTTCATATCTTAGCAATGATTCAATTCAATTGCCATTTCCACAAGAACCTGCATTCTTTCTGGAGGGCCAAATGGAGCTTAATACCGACAGTAAAGAATCAATTAATGAAATGTCTATAAGTGAATTCTATCCTCGGTAG 1869 0.427 MPFNIIILLLFFIGFLHSSSAQVIGRNSLHPQCSTHHNFTANSTFDFNLNTLFSSLTSNETAHLDFYNTTVDGGGETIYGLFMCRGDVNQDACHQCVVDSTAELAYYCRFSKAAVNWLDPCLVRYSQHNFFSTVDRKPKLKMLNTNNVSNQAGFMNVLMTVMNLTADEAAKPALMKKKSATKAVVVDIQTLYVMVQCTPDLSPGDCRTCLRGVIGNLPWCCEGKIGGRVAYPSCFARYELYMFFNSSTPLRPVRLPPPPPPPPPAPLTPPTPSDGKLNDLARFICLVGSESNTLEPLQFSLATIEAATNKFSQENCLGQGGFGQVYKGILSNGQEIAVKRLSKSSGQGVEEFKNEVLLIARLQHRNLVALLGFCIEGQEKILIYEYVPNKSLDYFLFGSQKIKVLNWEERCKIIGGVARGILYLHDYARVKIIHRDLKTSNILLDNEMNPKISDFGMAKMVGIHEIEESTSNIVGTYGYMSPEYAMFGQYSEKSDVFSFGVIVLEMISGRKITSSQDQSHGLLNYAWNQWKEEKILDVLDSSLNEPESLNEVDKCIQIGLLCVQENPEARPSMATVVSYLSNDSIQLPFPQEPAFFLEGQMELNTDSKESINEMSISEFYPR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4884g00026 622 ProSiteProfiles Protein kinase domain profile. 311 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00026 622 Coils Coil 622 622 - -
Pral4884g00026 622 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 276 386 - -
Pral4884g00026 622 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 387 588 - -
Pral4884g00026 622 Gene3D - 26 130 IPR038408 -
Pral4884g00026 622 Gene3D - 137 243 IPR038408 -
Pral4884g00026 622 Gene3D Phosphorylase Kinase; domain 1 286 386 - -
Pral4884g00026 622 SUPERFAMILY Protein kinase-like (PK-like) 294 601 IPR011009 -
Pral4884g00026 622 MobiDBLite consensus disorder prediction 252 271 - -
Pral4884g00026 622 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Pral4884g00026 622 ProSiteProfiles Gnk2-homologous domain profile. 136 243 IPR002902 -
Pral4884g00026 622 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 27 618 - -
Pral4884g00026 622 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 130 - -
Pral4884g00026 622 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524
Pral4884g00026 622 FunFam Cysteine-rich receptor-like protein kinase 25 138 243 - -
Pral4884g00026 622 CDD STKc_IRAK 317 580 - -
Pral4884g00026 622 Gene3D Transferase(Phosphotransferase) domain 1 387 587 - -
Pral4884g00026 622 MobiDBLite consensus disorder prediction 252 272 - -
Pral4884g00026 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Pral4884g00026 622 Pfam Salt stress response/antifungal 33 127 IPR002902 -
Pral4884g00026 622 Pfam Salt stress response/antifungal 147 241 IPR002902 -
Pral4884g00026 622 SMART serkin_6 311 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00026 622 Pfam Protein kinase domain 312 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4884g00026 Pral-Chr4884 236468 240234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4884g00026 29 622 Receptor kinase-like Gene Family AT4G05200 43.164 1.18e-174 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4884g00026 Pkinase 9.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4884g00026 - - pcin:129286093 946.806