Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4884g00025 ATGGATATGCCATTTCTGAAACTGCTATCCTATTTTCTGCTTCTTACCTTCTTGAATTTCGCTTCTACTTCTGAAATAGACATCCCTGCTTACTATGACCACAACTGCACAAGGAATAGAAACTTCACTTCCAATAGCCTCTACCAGTTCAACCTTAACACTCTTTTAATTTCCTTCTACTCCACGGCCACCCGCAATAACACCACTCCTGAATTCTACACCAACAGCGTTGGCAGCATAAGCTCGAACGACGCCGTATATGGAGAGTACATGTGCCGAGGTGATGTTCCCAGTCAGGTCTGTCGAGATTGCGTTCAGGACGCCACAAATAGAATAGCCTCGATGTGTACCTACAACAAAGAGGCAATCATCTGGTACGAGCAGTGCTTCCTCCGCTATTCCGACCGCTCTTTCTTCTCCACCCTCCAACAACAGCCTGCTCACAGCGTGGTACGGAGGTATAAGACAGGCAAGGAAGCGAACAAGACATTGAATGATGCGGTGGTGGAGGCAGCGACATCAGGGCCCACAGGTACCAAGAAATTCGCAACAAAAGAAGCAAACTTGAGTACTGGGGAATCGCTATACGCTCTTGCAGAGTGCACGCCGGATCTGTCCCCACAATTCTGTGGTGAGTGTCTACATGGCCTGATAGAAGATATTCTGAAGGAGGAGGACTACCTGAATGGTCCATTGCAGAATCCGAGCTGTTATTTGAGACTCGAAACATACCAATTTTATTATAAGGGCAACCAGCATCCCTCCATTGGTTCCGCTTATCCAGGGCTTGGAAGTCCTACTCTTGTACAATGGAACTGCTCGACCACCGAAAGCTTTACTGTCAACGATCCCTACCTAAACAACCTCAAAAGTCTCACTCTCGAGCTCTCCAGGACATCCAAAGACACCAAAAGCAATGGATCCCACAGCACCACAGTCGGAAACAATTCTAACACTACCGTCTACGGCCTCTTCATGTGTCGCGGTGACGTGCCCCTTGAGCTCTGCCATAAATGCGTCAATGAGGGAATTACGGTACTAAACTCAACGTGTCCCTCTTCCAAGGAGGCTATCATTTGGTATGACATGTGCATGCTTCGCTACTCCGATCGCTCTTTCTTCTCTACCCTAGACACACAACCTATATATGCAGTACCTGGTGGGTATACGATTGGAAACCAAACAGAGGGCTTCAATCGGCTATTAGCGAGTACACTAAACAGTTTAGTGGCGGCGACGTTGAACTCATCACCGCATGCAGGAGTGAAAAATTTTGCAACAAAAACAGAATTCAGCTCTTCGGAATTGACAACGTTGTACACTCTTGCACAATGTACTCCGATCCTGTCCAGCCAAGATTGTGAAAAATGTCTAGGGGTTGCTCTGCAAAATATCACGTCATGTTGTCTCGAAAGTAAAGGAGGACAAGTCATGAATCCTAGCTGCAACTTGAGGTTTGAATCGTACCGATTTTATAATGACAGTAAGAGTGATGCTTCGGTTCCACCTGCGTATCCCCCAAATACTAGTGGTGTTTTGGAGCCACCTGCCCATCCCCAAACTCACAAAGTTTCAGGTAATGCAGGAAAAGATAACGACCACTCACGAACAATCATAATAGCGGTGTCCGTCACTACTGTGGTCTCAATCATGCTTTTTTGTTTCGGCTTCTGTTACTGGAAGATTAAGAAGAGCAAGAGTTATAAGGAGATTTTGAAGAAAAACTTTGGAAGTGAAGGAGCCACATTAGAGTCATTGCAGTTCAATTTGGCAACAATTGAAGCTGCAACAGATAAGTTCTCGATTGAAAATAGAATAGGCAAAGGCGGATTTGGAGAAGTCTACATGGGCATTCTTCCTGACGGTAGCAAAATAGCAGTAAAGAGATTGTCAGAAAATTCTAGTCAGGGATTATTAGAATTCAAGAATGAGGTTCTACTAATTGCCAGACTTCAACATAGAAACCTGGTGGCATTATTAGGATTTTGCTTAAAACATCAAGAGAAAATACTTATTTATGAATACGTTCCCAACAAGAGCCTTGATTACTTTTTATTCGGTTCACAAAAGTCAAGAGTGTTAAATTGGTTGGAGCGTTACAAAATTATAGAAGGAATTACTCGAGGAATTCTTTATCTCCATGAACATTCACGTCTAAAAGTAATACATCGAGATCTCAAACCTAGCAATATTTTGCTAGATGATGAAATGAATCCAAAAATTTCTGACTTTGGCATGGCAAGAATGGTTGGTATTAATGAAACTAGAGGAAACACAAATAGAATTGTTGGAACACGGGGCTACATGTCTCCAGAATACATTAAGGATGGACTATTTTCTGAGAAATCAGATGTTTACAGTTTTGGAGTCTTTGTTTTAGAAATTATAAGTGGAAAGAATGTACACTCTCAATGTGAATCTCATGAATCTCAATATACTGGGGGACTCTTAAGTGATGCTTGGAAGCATTGGAGGGATGGAAGATTGACAGCTATATTGGATTCGAATCTGACAGAAGCTGGGTCACATAGTGAAATAATCAAATGCATCCATATCGGCTTGTTGTGTGTGCAGGGAAATCCAGGAGCAAGGCCTTCCATGAATAAAGTTGTTCAATATCTGAATAATGATTCAATGCAATTGCCAATTCCTCAAGAACCAGCATTCTTCATCCACAGTCAAATGGAACCAGCAGCAACCAGTAGAGAAATGGAGGCTCGACTTGGCAACCACAATCAATATTCCATCAACGAAGTGTCGGAGAGTATAATATCTCCTCGCTAG 2784 0.43 MDMPFLKLLSYFLLLTFLNFASTSEIDIPAYYDHNCTRNRNFTSNSLYQFNLNTLLISFYSTATRNNTTPEFYTNSVGSISSNDAVYGEYMCRGDVPSQVCRDCVQDATNRIASMCTYNKEAIIWYEQCFLRYSDRSFFSTLQQQPAHSVVRRYKTGKEANKTLNDAVVEAATSGPTGTKKFATKEANLSTGESLYALAECTPDLSPQFCGECLHGLIEDILKEEDYLNGPLQNPSCYLRLETYQFYYKGNQHPSIGSAYPGLGSPTLVQWNCSTTESFTVNDPYLNNLKSLTLELSRTSKDTKSNGSHSTTVGNNSNTTVYGLFMCRGDVPLELCHKCVNEGITVLNSTCPSSKEAIIWYDMCMLRYSDRSFFSTLDTQPIYAVPGGYTIGNQTEGFNRLLASTLNSLVAATLNSSPHAGVKNFATKTEFSSSELTTLYTLAQCTPILSSQDCEKCLGVALQNITSCCLESKGGQVMNPSCNLRFESYRFYNDSKSDASVPPAYPPNTSGVLEPPAHPQTHKVSGNAGKDNDHSRTIIIAVSVTTVVSIMLFCFGFCYWKIKKSKSYKEILKKNFGSEGATLESLQFNLATIEAATDKFSIENRIGKGGFGEVYMGILPDGSKIAVKRLSENSSQGLLEFKNEVLLIARLQHRNLVALLGFCLKHQEKILIYEYVPNKSLDYFLFGSQKSRVLNWLERYKIIEGITRGILYLHEHSRLKVIHRDLKPSNILLDDEMNPKISDFGMARMVGINETRGNTNRIVGTRGYMSPEYIKDGLFSEKSDVYSFGVFVLEIISGKNVHSQCESHESQYTGGLLSDAWKHWRDGRLTAILDSNLTEAGSHSEIIKCIHIGLLCVQGNPGARPSMNKVVQYLNNDSMQLPIPQEPAFFIHSQMEPAATSREMEARLGNHNQYSINEVSESIISPR 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4884g00025 927 Pfam Salt stress response/antifungal 394 489 IPR002902 -
Pral4884g00025 927 Pfam Salt stress response/antifungal 36 135 IPR002902 -
Pral4884g00025 927 Pfam Salt stress response/antifungal 161 244 IPR002902 -
Pral4884g00025 927 Pfam Salt stress response/antifungal 273 370 IPR002902 -
Pral4884g00025 927 ProSiteProfiles Gnk2-homologous domain profile. 267 373 IPR002902 -
Pral4884g00025 927 FunFam cysteine-rich receptor-like protein kinase 10 676 881 - -
Pral4884g00025 927 Gene3D Transferase(Phosphotransferase) domain 1 676 883 - -
Pral4884g00025 927 ProSiteProfiles Gnk2-homologous domain profile. 142 246 IPR002902 -
Pral4884g00025 927 ProSitePatterns Serine/Threonine protein kinases active-site signature. 721 733 IPR008271 GO:0004672|GO:0006468
Pral4884g00025 927 Gene3D - 266 373 IPR038408 -
Pral4884g00025 927 Gene3D - 388 491 IPR038408 -
Pral4884g00025 927 Gene3D - 148 246 IPR038408 -
Pral4884g00025 927 Gene3D - 30 138 IPR038408 -
Pral4884g00025 927 ProSitePatterns Protein kinases ATP-binding region signature. 606 628 IPR017441 GO:0005524
Pral4884g00025 927 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 272 927 - -
Pral4884g00025 927 MobiDBLite consensus disorder prediction 505 531 - -
Pral4884g00025 927 ProSiteProfiles Gnk2-homologous domain profile. 379 491 IPR002902 -
Pral4884g00025 927 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 29 138 - -
Pral4884g00025 927 Pfam Protein kinase domain 601 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00025 927 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 561 675 - -
Pral4884g00025 927 CDD STKc_IRAK 606 876 - -
Pral4884g00025 927 Gene3D Phosphorylase Kinase; domain 1 561 675 - -
Pral4884g00025 927 SMART serkin_6 600 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00025 927 ProSiteProfiles Gnk2-homologous domain profile. 30 138 IPR002902 -
Pral4884g00025 927 SUPERFAMILY Protein kinase-like (PK-like) 585 900 IPR011009 -
Pral4884g00025 927 ProSiteProfiles Protein kinase domain profile. 600 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4884g00025 Pral-Chr4884 214840 220072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4884g00025 266 927 Receptor kinase-like Gene Family AT4G05200 41.973 2.93e-170 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4884g00025 Pkinase 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4884g00025 - - pcin:129286968 855.514