Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4884g00024 ATGACCTTCAACATTATAATTTTGTCACTCTTCTTCTTCATCGGCTTCCTCCTCAATTCTTCTTCTGCTCAAGTCATAGGTCGTAATGATCTTTACCCTCAGTGCTCCACCGGCAGTAATTTCACTGCCAATAGTTCCTTCGACTCTAACCTCCAAACTCTATTTTCTTCCTTAACTTCCAACGAAACCGCCAACCTCGACTTCTACAACACAACCGTTGGCCGCGGCGGCGAGACTGTATACGGCCTCTTCATGTGCGTGGGTCACGTCAACCAGGACATATGCCGCCAGTGCGTAGCTAACTCAATCCTACAGGCTGGATTCATGAATGTAATGACGATTGCTCTGAACCAGATGGCGGATGAGGCTTCCAAGTCTGCTGTGATGAAGCAGAAGTGTAGGACGAATAAGGTGGCGGTAGAGTTTCAAACTATGTACGTTCTGGTTCAGTGCACGCCGGACCTTTCGTCGGCGGATTGCAGAAGGTGTCTGAGCGGAGTGATTGGGGACTTTAGATGGTATTTTTATGGGAAGATCGGAGGAAGAATCCTATATCCAAGTTGCTTCGCTCGTTATGAGTTATATCCGTTCTCTAATTCTTTTACGCCTCTTCTGCCAGTAACGCTGCCGCCTGCTTCGGCTCTACTTTCTCCTCCAAATCCTGTTGGAAATGAAAGCAACAACTTAGAACCTCTGCAATTTAGTTTGGTCACTATTGAAGCTTCAACAAATAATTTTTCAGATGAGAAGTGTTTATTAGGACGAGGTGGATTTGGAAGAGTTTACAAGGGCATTCTTTCAAAGGGCCAAGAAATAGCTGTCAAGAGACTTTCAAAATGTTCAGGTCAAGGCGCTGAAGAATTCAAGAACGAGATTTTATTAATTGCCAAACTCCAGCACAGAAATTTGGTAGCTTTGCTTGGATATTGCATAGAAGAAAAAGAGAAAATTCTTATCTATGAATATGTTCCGAACAGAAGCCTTGATTACTTTCTATTTGGTTCCATAGAAGGAAAAGTATTAAGTTGGATGGAGCGTTGTAAAATTATTGGAGGAGTAGCTCGAGGAATTCTTTATCTCCATCAGTATTCCCGTCTTAAAATTATACATCGTGATTTAAAGCCAAGCAATATTTTATTAGATGATGAAATGAATCCAAAAATTTCTGATTTTGGATTAGCTAAAATGGTTGCCATCAACTCACAAGAAGGAAGTACAAATAGAATTGTTGGAACGTATGGTTATATGTCTCCAGAATATGCGATGTATGGACAATATTCTGAAAAATCAGATGTTTTTAGTTTTGGAGTTATAATTTTAGAAATCATTAGTGGAAAGAAGAACACAAGTCGTCAAAATGAATCACAATATGTTGATGGCCTATTGAGCTATGCTTGGAAGCAATGGAAAGAGGAAAAGTTGCTGGAGATATTAGATTTAAATATAAAAGAATTTGCGTCATATAATGAAGTGATCAGATGCATCCATATTGGTTTGTTATGTGTTCAAGAAAATCCAGATTCAAGACCCACAATGGCAACGGTTGTTTCATATCTGAGTAATGATTCCATTCAACTGCCATTGCCACGGGAACCTGCATTCTTTCTGCACGATGGAATGGAGCCGAGTACCAGTGGAAGTAAGGAATCAGCCTCGACTGTTGAAGTGTCTATGAGTGAATTCTTTCCTCGTTAG 1695 0.4047 MTFNIIILSLFFFIGFLLNSSSAQVIGRNDLYPQCSTGSNFTANSSFDSNLQTLFSSLTSNETANLDFYNTTVGRGGETVYGLFMCVGHVNQDICRQCVANSILQAGFMNVMTIALNQMADEASKSAVMKQKCRTNKVAVEFQTMYVLVQCTPDLSSADCRRCLSGVIGDFRWYFYGKIGGRILYPSCFARYELYPFSNSFTPLLPVTLPPASALLSPPNPVGNESNNLEPLQFSLVTIEASTNNFSDEKCLLGRGGFGRVYKGILSKGQEIAVKRLSKCSGQGAEEFKNEILLIAKLQHRNLVALLGYCIEEKEKILIYEYVPNRSLDYFLFGSIEGKVLSWMERCKIIGGVARGILYLHQYSRLKIIHRDLKPSNILLDDEMNPKISDFGLAKMVAINSQEGSTNRIVGTYGYMSPEYAMYGQYSEKSDVFSFGVIILEIISGKKNTSRQNESQYVDGLLSYAWKQWKEEKLLEILDLNIKEFASYNEVIRCIHIGLLCVQENPDSRPTMATVVSYLSNDSIQLPLPREPAFFLHDGMEPSTSGSKESASTVEVSMSEFFPR 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4884g00024 564 Gene3D Transferase(Phosphotransferase) domain 1 323 526 - -
Pral4884g00024 564 ProSitePatterns Protein kinases ATP-binding region signature. 253 275 IPR017441 GO:0005524
Pral4884g00024 564 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 219 322 - -
Pral4884g00024 564 ProSiteProfiles Protein kinase domain profile. 247 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00024 564 MobiDBLite consensus disorder prediction 543 557 - -
Pral4884g00024 564 Pfam Salt stress response/antifungal 113 195 IPR002902 -
Pral4884g00024 564 Pfam Salt stress response/antifungal 35 107 IPR002902 -
Pral4884g00024 564 MobiDBLite consensus disorder prediction 540 564 - -
Pral4884g00024 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 368 380 IPR008271 GO:0004672|GO:0006468
Pral4884g00024 564 FunFam Cysteine-rich receptor-like protein kinase 25 103 197 - -
Pral4884g00024 564 Gene3D Phosphorylase Kinase; domain 1 221 322 - -
Pral4884g00024 564 ProSiteProfiles Gnk2-homologous domain profile. 90 197 IPR002902 -
Pral4884g00024 564 Gene3D - 106 197 IPR038408 -
Pral4884g00024 564 Gene3D - 29 105 IPR038408 -
Pral4884g00024 564 Pfam Protein kinase domain 252 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00024 564 CDD STKc_IRAK 253 519 - -
Pral4884g00024 564 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 83 550 - -
Pral4884g00024 564 FunFam cysteine-rich receptor-like protein kinase 10 323 526 - -
Pral4884g00024 564 SMART serkin_6 247 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00024 564 SUPERFAMILY Protein kinase-like (PK-like) 229 543 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4884g00024 Pral-Chr4884 205887 209663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4884g00024 31 558 Receptor kinase-like Gene Family AT4G05200 42.496 6.32e-155 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4884g00024 Pkinase 2.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4884g00024 - - pcin:129286093 739.569