Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4884g00018 ATGGCCATCGGTTCCCTCAAAATTGTCTCGCTCTTGCTTATTAGCCTCCTCTTTTCTCCTACAAATGAAGCACATGTTACTTATCTTCACCACAATTGCTCTCCCAACATAACCTTCGCTGCCAACAGTGCTTTTCAATCGGACCGAACGACGCTCTTCTCTTCCCCAGCTTTCGTCAACACCGACTTCTACAACGCCACCGTTGTCGGTGGCGGCGACACCGTCCACGGCCTCTTCATGTGTCGGGGTGACGTCAACCTCGCGATGTGCCACCAGTGCGTCGTTCACGCAACCCAACGATTATCTTCGGAGTGCCGAGTTTCGAAGGAGGCAATAATCTGGTACGACGAGTGCTTGCTTCGCTATTCTAACCGTTTCTTCTTCTCCACCATTGACACGAGGCCTAGACTCAGCCTCTTTGACGCCGGAAGTGTCTCAAACCAGGCAAGCTTCATGAGAACATTGTACGATACAATGAACAGGACGGCAGATGAGGCGGCTAAACCAGCTGTTGGGAAAAAGAAGTATGCGACCGGAGCAGCGAATTTCTCATCGTTTCAAACTGTGTATTGTCTAGCACAGTGCACACCGGACCTTTCGCCGTCAGATTGCAGAAGTTGCCTGAGTGGTGTGATTGGGGAACTTAAGTGGTGTTGTAGTGGGAAGCAAGGAGGAAGAGTGCTGTACCCGAGCTGTAATGTCCGCTATGAGTTGCACCCTTTCTATCAGTCGGAAGCTGCAGGTGTTCCTCCTACAAATAGTACCGGTTCCCAAGGAAAAGGTGGAATCTCATCGGGGGCGATTGTTGCGATTGTGGTTCCAACTTCTGTGGCTGTCCTGATATTTATAGTCGGCATCTGTTGCCTGAGTAAACGAGCAATGGAGAAGTACGACTCTGATGCCAAAGGTAAATCTGCAATTGACATCGGCAAAGTGGATTCACTGCAATATGATTTCAGTACAATTGAAGCAGCCACGAACAAGTTCTCTGCAGATAACAAGCTTGGTGAAGGCGGATTTGGACCGGTTTACAAGGGGACGCTTGCAAATGGACTAGAAATTGCTGTGAAGAGACTCTCCCGAGAATCTGGACAAGTTGTACAAGAATTTAAGAATGAAGTAGAGGTGGTTGCGAAGTTACAGCACAGAAATTTGGTGAGGCTGCTGGGATTTTGTGTGCAAGGGCAAGAAAATATTCTTGTTTATGAATATTTTCCCAACAAAAGTCTTGATCACATTCTTTTCGAACCTGAAAAGCAAAAACAGCTAGATTGGACAAAGCGGTACAAGATTGTCAAAGGAATTGCTCAAGGCATTAAATACCTTCATGAAGATTCAAGACTTAAAATTATACATCGTGATCTTAAAACTAGTAATATATTATTGGACAGTGACATGAATTTAAAAATATCAGATTTTGGTTTGGCAAGGATTTTTATGGTGGACCAAACTCATGAAACCATTAACATTGCTGGAACACTTGGATATATATCTCCGGAATACGCCATGCATGGACAGCTTTCTGTTAAGTCTGATGTGTTCAGCTTTGGTGTCCTTTTAATGGAGATTATAAGTGGGAGGAGGAATAGTCCTTCCTATCAAATGGAGGGTGGTGAGGACCTGGACCTGCTTATCTATGCCTGGAAACTTTGGAAGGATGGAGAACCCTTGGAACTGTTGGACCCCACAATAAGAGAATCTTATGCTCCAGATGAAGTTATGAGATGCATCCACATTGGTTTGCTGTGCGTTCAAAGTGATCCAGCAGAGAGGCCTTCAATGTCATCCATAGTTCTGATGCTTGAAAATTATCCTATGACTCTGCCAACCCCTTCGCTGCCTGCATATTTTGTGCAAAATGGAGCTTCTCGAAACATTCTTGGTCAATCCACGCCCAACACACTACCAATGTCAGTCAACGAGATGTCGGTTAGTGATGAATGCGTCGGTAAGCTTGAAAGTTGGAGGTTTTAA 1974 0.4534 MAIGSLKIVSLLLISLLFSPTNEAHVTYLHHNCSPNITFAANSAFQSDRTTLFSSPAFVNTDFYNATVVGGGDTVHGLFMCRGDVNLAMCHQCVVHATQRLSSECRVSKEAIIWYDECLLRYSNRFFFSTIDTRPRLSLFDAGSVSNQASFMRTLYDTMNRTADEAAKPAVGKKKYATGAANFSSFQTVYCLAQCTPDLSPSDCRSCLSGVIGELKWCCSGKQGGRVLYPSCNVRYELHPFYQSEAAGVPPTNSTGSQGKGGISSGAIVAIVVPTSVAVLIFIVGICCLSKRAMEKYDSDAKGKSAIDIGKVDSLQYDFSTIEAATNKFSADNKLGEGGFGPVYKGTLANGLEIAVKRLSRESGQVVQEFKNEVEVVAKLQHRNLVRLLGFCVQGQENILVYEYFPNKSLDHILFEPEKQKQLDWTKRYKIVKGIAQGIKYLHEDSRLKIIHRDLKTSNILLDSDMNLKISDFGLARIFMVDQTHETINIAGTLGYISPEYAMHGQLSVKSDVFSFGVLLMEIISGRRNSPSYQMEGGEDLDLLIYAWKLWKDGEPLELLDPTIRESYAPDEVMRCIHIGLLCVQSDPAERPSMSSIVLMLENYPMTLPTPSLPAYFVQNGASRNILGQSTPNTLPMSVNEMSVSDECVGKLESWRF 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4884g00018 657 Gene3D - 136 241 IPR038408 -
Pral4884g00018 657 Gene3D - 24 127 IPR038408 -
Pral4884g00018 657 FunFam Cysteine-rich receptor-like protein kinase 10 291 404 - -
Pral4884g00018 657 FunFam cysteine-rich receptor-like protein kinase 10 405 608 - -
Pral4884g00018 657 ProSiteProfiles Gnk2-homologous domain profile. 133 241 IPR002902 -
Pral4884g00018 657 SMART serkin_6 329 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00018 657 ProSiteProfiles Protein kinase domain profile. 329 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00018 657 ProSiteProfiles Gnk2-homologous domain profile. 27 127 IPR002902 -
Pral4884g00018 657 CDD STKc_IRAK 335 603 - -
Pral4884g00018 657 Gene3D Phosphorylase Kinase; domain 1 290 404 - -
Pral4884g00018 657 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 86 645 - -
Pral4884g00018 657 SUPERFAMILY Protein kinase-like (PK-like) 316 621 IPR011009 -
Pral4884g00018 657 FunFam Cysteine-rich receptor-like protein kinase 25 135 241 - -
Pral4884g00018 657 Pfam Protein tyrosine and serine/threonine kinase 331 599 IPR001245 GO:0004672|GO:0006468
Pral4884g00018 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Pral4884g00018 657 Gene3D Transferase(Phosphotransferase) domain 1 405 607 - -
Pral4884g00018 657 Pfam Salt stress response/antifungal 37 124 IPR002902 -
Pral4884g00018 657 Pfam Salt stress response/antifungal 146 237 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4884g00018 Pral-Chr4884 134502 137492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4884g00018 5 645 Receptor kinase-like Gene Family AT4G05200 46.567 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4884g00018 PK_Tyr_Ser-Thr 7.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4884g00018 - - gmx:100305391 818.92