Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4884g00017 ATGTCCATGGTCATCGCTTCCCTCAAAATTGTCTCGCTCTTGCTTATTAGCCTCCTCTTTTCTCCTACAAATGAAGCGCAGGTTACTTATCTTCACCACAATTGCTCTCCCAGCATAACCTTCGCTGCCAACAGTGCTTTTCAATCGGACCGAATGACACTCTTCTCTTCCTTAGCTTTCGCCAACACCGACTTCTACAACGCCACCGTTGTCGGTGGCGGCGACGCCGTCCACGGCCTCTTCATGTGTCGGGGTGACGTCAACCTCTCGATGTGCCACCAGTGCGTCGTTAACGCAACCCAACGATTATCTTCCGAGTGCCGAGTTTCGAAGGAGGCAATAATCTGGTACGACGAGTGCTTGCTTCGCTATTCTAACCGTTTCTTCTTCTCCACCGTTGACACGAGGCCTAGACTCAGCCTCTTCGACGCCGGAAGTGTCTCAAACCAGGCAAGCTTCATGAGAACATTGTACGATATAATGAACAAGACGGCAGATGAGGCGGCTAAACCTCCTGTTGGGAAAAAGAAGTATGCGACCGGAACAGCGAATTTCTCAGGGTTTCAAACTATGTATTGTCTAGCACAGTGCACGCCGGACCTTTCGCCGTCAGATTGCAGAAGTTGCCTGAGTGGTGTGATTGGGGAACTTAAGTGGTGTTGTGGTGGGAAGCAAGGAGGAAGAGTGCTGTACCCGAGCTGTAATGTTCGCTATGAGTCGTACCCTTGCTATCAATCGGAAGCTGCGAGTGTTCCTCCTGCAAATACTGGTTCCCAAGGAAAAGGTGGAATCTCATCGGGGGCGATTGTTGCTATTGTGGTTCCAACTTCTGTGGCTGTCCTAGTATTTATAGTCGGCATCTGTTGCTTGAGGAAACGAACAACGAAGAAGTACGACTCTGTTGCCGAAGGAAAATCTGCATTTGACATCGGCAATGTGGATTCACTGCAATATGATTTCAGTACAATTGAAGCAGCCACGAACAAGTTCTCTGTAGTTAACAAGATTGGTGAAGGCGGGTTTGGAGGGGTTTACAAGGGGACGCTTGCAAATGGACTAGAAATTGCTGTGAAGAGACTCTCCCGAACATCTAGACGTGGTGCAGAAGAATTTAAGAATGAAGTAGAGGTGCTGGCCAGGCTACAACATAGATATTTAGTGAGACTTCTAGGTTTCTGCGTACATGGAGAAGAGAGGATACTTGTTTATGAATATATGCCCAACAAAAGTCTTGATCGCATTCTTTTTGACCCTGAAATGCAAAGGCAGCTAGACTGGACAAAACGTTATGACATTGTGAAAGGAATTGCTCGAGGGATTCAATATCTACATGAAGATGCAACACTTAAAATCATACATCTTGATCTTCAACTTTCCAATATACTATTGGATAGTGATATGAATCCAAAAATCTCAGATTTTGGTATAGCAATAATTTTTCCGATCGATCAAGCTCAAGGAAATACCAATCCCATTGTGGGAAAAAATGGCTATTTATCTCCTGAATATGCTATGCATGGAGAGTTTTCTGTTAAGTCTGATGTGTACAGTTTCGGCTTCCTTCTATTGGAGATTATAAGTGGGAAGAAGAATACTTCATATCGAGTGGAGGCTGGTAAGGACTTGCTTAGCAATGCGTGGAAACTTTGGAAAGATGGAGAGCCCTTAGACTTGTTGGACCCCACAATAAGCGAATCTTATGCTCGAAATGAAGTCTTGAGATGCATCCACATTGGTCTGCTGTGTGTTCAAGAAGATCCAGCAGATAGACCTTCAATGGCATCCATTATTCTGATGCTTGATAGTTACTCTCTTATACTGCCAACCCCTTCGCAGCCTGCATTTTTCGACCCTAGTTCAGAAGAAGAATCTGTATTGTGA 1881 0.4519 MSMVIASLKIVSLLLISLLFSPTNEAQVTYLHHNCSPSITFAANSAFQSDRMTLFSSLAFANTDFYNATVVGGGDAVHGLFMCRGDVNLSMCHQCVVNATQRLSSECRVSKEAIIWYDECLLRYSNRFFFSTVDTRPRLSLFDAGSVSNQASFMRTLYDIMNKTADEAAKPPVGKKKYATGTANFSGFQTMYCLAQCTPDLSPSDCRSCLSGVIGELKWCCGGKQGGRVLYPSCNVRYESYPCYQSEAASVPPANTGSQGKGGISSGAIVAIVVPTSVAVLVFIVGICCLRKRTTKKYDSVAEGKSAFDIGNVDSLQYDFSTIEAATNKFSVVNKIGEGGFGGVYKGTLANGLEIAVKRLSRTSRRGAEEFKNEVEVLARLQHRYLVRLLGFCVHGEERILVYEYMPNKSLDRILFDPEMQRQLDWTKRYDIVKGIARGIQYLHEDATLKIIHLDLQLSNILLDSDMNPKISDFGIAIIFPIDQAQGNTNPIVGKNGYLSPEYAMHGEFSVKSDVYSFGFLLLEIISGKKNTSYRVEAGKDLLSNAWKLWKDGEPLDLLDPTISESYARNEVLRCIHIGLLCVQEDPADRPSMASIILMLDSYSLILPTPSQPAFFDPSSEEESVL 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4884g00017 626 ProSiteProfiles Gnk2-homologous domain profile. 29 129 IPR002902 -
Pral4884g00017 626 ProSiteProfiles Protein kinase domain profile. 330 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00017 626 Gene3D Transferase(Phosphotransferase) domain 1 406 606 - -
Pral4884g00017 626 CDD STKc_IRAK 336 601 - -
Pral4884g00017 626 FunFam Cysteine-rich receptor-like protein kinase 25 137 243 - -
Pral4884g00017 626 ProSiteProfiles Gnk2-homologous domain profile. 135 243 IPR002902 -
Pral4884g00017 626 Gene3D - 26 129 IPR038408 -
Pral4884g00017 626 Gene3D - 138 242 IPR038408 -
Pral4884g00017 626 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 291 405 - -
Pral4884g00017 626 Pfam Protein tyrosine and serine/threonine kinase 332 598 IPR001245 GO:0004672|GO:0006468
Pral4884g00017 626 FunFam cysteine-rich receptor-like protein kinase 10 406 607 - -
Pral4884g00017 626 Gene3D Phosphorylase Kinase; domain 1 291 405 - -
Pral4884g00017 626 SUPERFAMILY Protein kinase-like (PK-like) 316 620 IPR011009 -
Pral4884g00017 626 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 88 622 - -
Pral4884g00017 626 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Pral4884g00017 626 Pfam Salt stress response/antifungal 148 241 IPR002902 -
Pral4884g00017 626 Pfam Salt stress response/antifungal 39 126 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4884g00017 Pral-Chr4884 115731 118731 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4884g00017 6 616 Receptor kinase-like Gene Family AT4G05200 48.025 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4884g00017 PK_Tyr_Ser-Thr 6.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4884g00017 - - gmx:100305391 802.742