Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4884g00016 ATGGTCATCGCTTCTCTCAAAATTGTCTCTTTCTTGCTTATTAGCGTCCTCTTTTCCCCTGCAAATGAAGCACAGGGTACTTATCTTCACCACAATTGCTCTCCCAACATAACCTTCGCTGCCAACAGTGCTTTTCAATCGGACCGAACGACACTCTTCTCTTCCTTAGCTTTCGCCAACGCCGACTTCTACAACTCCACCGTTGTCGGTGGCGGCGGCACGGTCCACGGCCTCTTTATGTGTCGGGGTGACGTCAACCTCTCGATGTGCCACCAGTGCGTCGTTAACGCAACTCAACGATTATCTTCCGAGTGCGGAGTTTCGAAGGAGGCAATAATCTGGTACGACGAGTGCTTGCTTCGCTATTCTAACCGTTTCTTCTTCTCCACCGTTGACACGAGGCCTAGACTCAGCTTCTTCGACGCCGGAAGTTTCTCAAACCAGGCAAGCTTCATGAGAACATTGTACGATATAACAAACAAGACGGCAGATGAGGCGGCTAAACCTCCTGTTGGGAAAAAGAAGTATGCGACCGGAACAGCGAATTTCTCAGGGTTTCAAACTATGTATTGTCTAGCACAGTGCACACCGGACCTTTCGCCGTCAGATTGCAGAAGTTGCCTGAGTGGTGTGATTCGGGAACTCAAGTGGTGTTGTGGTGGGAAGCAAGGAGGAAGAGTGCTGTACCCGAGCTGTAATGTTCGCTATGAGTCGTACCCTTTCTATCAATCGGAAACTGCGAGTGTTCCTCCTGCAAATACTGGTTCCCAAGGAAAAGGTGGAATCTCATCGGGGACGATTGTTGCTATTGTGGTTCCAACTTCTGTGGCTGTCCTGATATTTATGGTCGGCATCTGTTGCTTGGGGAAACGAACAATGAAGAAGTACGACTCTGTTGCCGAAGGCAAATCTGCATTTGACATCGGCAATCTGGATTCACTGCAATATGATTTCAGTACAATTGAAGCAGCCACGAACAAGTTCTCTGTAGTTAACAAGATTGGTCAAGGCGCGTTTGGAGGGGTTTACAAGGGGACGCTTGCAAATGGACTAGAAATTGCTGTGACGAGACTCTCCCGAAGATCTGGACAAGGTGTAGAAGAATTTAAGAATGAAGTAGAGGTGCTTGCCAGGCTACAACATGGAAATTTAGTGAGACTTCTAGGTTTCTGCGCACGTGGAGAAGAGAGGATACTTGTTTATGAATATATGCCCAACAAAAGTCTTGATTGCATTCTTTTTGACCCTGAAATGCAAAGGCAGCTAGACTGGACAAAACGTTATGACATTGTGAAAGGAATTGCTCGAGGGATTCAATATCTACATGAAGATGCAACACTTAAAATCATACATCTTAATCTTCAAGTTTCCAATATACTATTAGATAGTGATATGAATCCAAAAATCTCAGATTTTGGTATAGCAGTAATTTTTCCGATCGATCAAACTCAAGGAAATACCAATCGCATTGTGGGAAAATGTGGCTATTTATCTCCTGAATATGCTATGCATGGAGAGTTTTCTGTTAAGTCTGATGTGTACAGTTTCGGCTTCCTTCTATTGGAGATTATAAGTGGGAAGAAGAATACTTCATATCGAGTGGAGGCTGGTAAGGACTTGCTTAGCAATGCGTGGAAACTTTGGAAAGATGGAGAGCCCTTAGACTTGTTGGACCCCACAATAAGCGAATCTTATGCTCGAAATGAAGTCTTGAGATGCATCCACATTGGTCTGCTGTGTGTTCAAGAAGATCCAGCAGATAGACCTTCAATGGCATCCATTATTCTGATGCTTGATAGTTACTCTCTTATACTGCCAACCCCTTCGCAGCCTGCATTTTTCGACCCTAGTTCAGAAGAAGAATCTGTATTGTGA 1875 0.4485 MVIASLKIVSFLLISVLFSPANEAQGTYLHHNCSPNITFAANSAFQSDRTTLFSSLAFANADFYNSTVVGGGGTVHGLFMCRGDVNLSMCHQCVVNATQRLSSECGVSKEAIIWYDECLLRYSNRFFFSTVDTRPRLSFFDAGSFSNQASFMRTLYDITNKTADEAAKPPVGKKKYATGTANFSGFQTMYCLAQCTPDLSPSDCRSCLSGVIRELKWCCGGKQGGRVLYPSCNVRYESYPFYQSETASVPPANTGSQGKGGISSGTIVAIVVPTSVAVLIFMVGICCLGKRTMKKYDSVAEGKSAFDIGNLDSLQYDFSTIEAATNKFSVVNKIGQGAFGGVYKGTLANGLEIAVTRLSRRSGQGVEEFKNEVEVLARLQHGNLVRLLGFCARGEERILVYEYMPNKSLDCILFDPEMQRQLDWTKRYDIVKGIARGIQYLHEDATLKIIHLNLQVSNILLDSDMNPKISDFGIAVIFPIDQTQGNTNRIVGKCGYLSPEYAMHGEFSVKSDVYSFGFLLLEIISGKKNTSYRVEAGKDLLSNAWKLWKDGEPLDLLDPTISESYARNEVLRCIHIGLLCVQEDPADRPSMASIILMLDSYSLILPTPSQPAFFDPSSEEESVL 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4884g00016 624 Pfam Salt stress response/antifungal 37 124 IPR002902 -
Pral4884g00016 624 Pfam Salt stress response/antifungal 146 239 IPR002902 -
Pral4884g00016 624 ProSiteProfiles Gnk2-homologous domain profile. 133 241 IPR002902 -
Pral4884g00016 624 FunFam cysteine-rich receptor-like protein kinase 10 404 605 - -
Pral4884g00016 624 Pfam Protein tyrosine and serine/threonine kinase 330 596 IPR001245 GO:0004672|GO:0006468
Pral4884g00016 624 FunFam Cysteine-rich receptor-like protein kinase 10 290 403 - -
Pral4884g00016 624 Gene3D Phosphorylase Kinase; domain 1 290 403 - -
Pral4884g00016 624 ProSiteProfiles Protein kinase domain profile. 328 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00016 624 ProSiteProfiles Gnk2-homologous domain profile. 27 127 IPR002902 -
Pral4884g00016 624 SUPERFAMILY Protein kinase-like (PK-like) 315 618 IPR011009 -
Pral4884g00016 624 FunFam Cysteine-rich receptor-like protein kinase 25 135 241 - -
Pral4884g00016 624 Gene3D - 25 127 IPR038408 -
Pral4884g00016 624 Gene3D - 136 241 IPR038408 -
Pral4884g00016 624 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 86 620 - -
Pral4884g00016 624 CDD STKc_IRAK 334 599 - -
Pral4884g00016 624 Gene3D Transferase(Phosphotransferase) domain 1 404 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4884g00016 Pral-Chr4884 101808 105500 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4884g00016 4 614 Receptor kinase-like Gene Family AT4G05200 47.468 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4884g00016 PK_Tyr_Ser-Thr 3.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4884g00016 - - gmx:100305391 800.431