Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4884g00012 ATGTCCGTCTTCATCGTCCTTTCTCTCTTGGGATTTCTGAGCTTCACACCCGAGGCTGCTCCAGAATTTAGAAGTTATTCCTGTACTAATGGAAGCTATTTCGGACCCAACAACAGTACATTCCAAGCCAATTTGAACTTTCTTCTCTCTTCCCTAACCTCCAACGCTTCTCTCCCCGACGGTTACTACCGTACCACCGTGTCCCCGTCAACCCCTTCCACCATCACCGGGCTTTTCCTCTGTCGCGGCGACGTCACCCCCGCCGTGTGCCAGCCTTGCGTTGCCGCCGCATCCAAGGAGATAAGACGCCTCTGCCCAAACCAAACAGAGTCCATAATCTGGTACGATGTGTGTATGCTTCGTTACTCGAACGGGGACTTGAACGCCATGGTTCCTTATGTGAGTTTGCGAAACGAAGACACCATAGCTAGCTCGGAACGGGTTCGATTCGACGGCGTGCTGTCGAACTTGTTGAAGGATGTGACAGCAAAAGCTAATACCCAGACAGGGAAGAGGTTTGCTACGGCGGAAGTGAACTTCACGTCGTCGGAAACCTTGTACGGCCTCGCACATTGCACTCCTGACTTGGCCGTTTCTACTTGTGATTCTTGTTTCAGCAGTGCCATTGCATCTCTTCCAAGTTGCTGTAGCGGGAGCAAGGGGGCAAATGTCCTGGCTCCGTCATGTAATATGAGATATGAATTTTATCGGTTTTACAATATAACCCACTTATCCGCTGAACCACTGGTTCCCCCTACTTCAGGAAGTAGAAATATCTCAATGATTGTTGCGATTGTTGTTCCAATTGTTGTTGCTTTGGCACTTCTCGTTGTGGGTTGTTGTTTCCTCCGTAAGAGAGCAAGCAAGAAGTACAACTCATTCACAGAGGATGCTGGGATTGATATTTCAGAAATAGAGTCTTTGCAATTTGAATTGGCAGCCATAGAAGCTGCCACGAAAAAGTTCTCAGATAAGAACAAGATTGGCCAAGGTGGATATGGGGCAGTTTATAAGGGCATCCTTCCAAACGGACAGGAGATAGCTGTGAAGAGGTTGTCGGTAACCTCCTTGCAGGGTGCTATGGAGTTTAGAAATGAAGCGGCTCTTGTGGCCAAACTTCAACACCGGAATTTAGTGAGGTTGTTGGGATTTTGCTTAGAAGGGCAAGAGAAGATACTTATCTATGAATATGTCCCAAACAAAAGCCTCGACAGGTTTCTATTTGATCCTGAAAGGAAAACAAGACTAGATTGGCCAAAACGCTACAAGATTATTGCAGGCATTGCTCGAGGAATGCTATATCTCCATGAAGATTCTCAACTTAGAATAATTCATCGTGACCTCAAAGCTAGTAATGTCCTACTAGATGCTAGTATGAATCCTAAAATCTCAGACTTTGGTATGGCAAAAATCTTCCAAGGTGATCAGGCTCAAGCAAATACAGGAAGAATAGTTGGGACCTTTGGTTACATGTCTCCAGAGTATGCGATGCACGGACAATTTTCTGTAAAATCAGATGTGTTTAGCTTTGGTGTCTTGGTTTTAGAGATTATTACTGGCAAGAAGAACACTGATTTGTACCAATCACATCAAGCCAATGACCTCTTAAGCTATGCCTGGAATAACTGGACACGAAAAACACCTCTGGAGTTGTTGGATCCAACACTGAGAGGTTCTTATTCAAGAAATGAAGTCATAAGATGTATCCATATTGCTTTATCATGCGTTCAGGAGAACCCTTCTGACAGACCGTCGATGGCAAATATAGTACTCATGCTCAACAGTTACTCTGTTACTTTGTCATTGCCTCGAAAGCCTGCATCCTTACTGGGCAGAAGAACACCAAACAGGCAAAACAATGTTGTTGATTCTGACCAATCTACATGTTCGATTCTATGGTCTACAGATGAAGCACCCATCACTGACGTTTACCCTCGATAA 1941 0.4508 MSVFIVLSLLGFLSFTPEAAPEFRSYSCTNGSYFGPNNSTFQANLNFLLSSLTSNASLPDGYYRTTVSPSTPSTITGLFLCRGDVTPAVCQPCVAAASKEIRRLCPNQTESIIWYDVCMLRYSNGDLNAMVPYVSLRNEDTIASSERVRFDGVLSNLLKDVTAKANTQTGKRFATAEVNFTSSETLYGLAHCTPDLAVSTCDSCFSSAIASLPSCCSGSKGANVLAPSCNMRYEFYRFYNITHLSAEPLVPPTSGSRNISMIVAIVVPIVVALALLVVGCCFLRKRASKKYNSFTEDAGIDISEIESLQFELAAIEAATKKFSDKNKIGQGGYGAVYKGILPNGQEIAVKRLSVTSLQGAMEFRNEAALVAKLQHRNLVRLLGFCLEGQEKILIYEYVPNKSLDRFLFDPERKTRLDWPKRYKIIAGIARGMLYLHEDSQLRIIHRDLKASNVLLDASMNPKISDFGMAKIFQGDQAQANTGRIVGTFGYMSPEYAMHGQFSVKSDVFSFGVLVLEIITGKKNTDLYQSHQANDLLSYAWNNWTRKTPLELLDPTLRGSYSRNEVIRCIHIALSCVQENPSDRPSMANIVLMLNSYSVTLSLPRKPASLLGRRTPNRQNNVVDSDQSTCSILWSTDEAPITDVYPR 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4884g00012 646 SUPERFAMILY Protein kinase-like (PK-like) 308 621 IPR011009 -
Pral4884g00012 646 ProSiteProfiles Gnk2-homologous domain profile. 22 127 IPR002902 -
Pral4884g00012 646 CDD STKc_IRAK 328 594 - -
Pral4884g00012 646 SMART serkin_6 322 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00012 646 Gene3D - 133 238 IPR038408 -
Pral4884g00012 646 Gene3D - 21 126 IPR038408 -
Pral4884g00012 646 ProSiteProfiles Protein kinase domain profile. 322 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00012 646 FunFam cysteine-rich receptor-like protein kinase 10 398 600 - -
Pral4884g00012 646 ProSiteProfiles Gnk2-homologous domain profile. 130 238 IPR002902 -
Pral4884g00012 646 FunFam Cysteine-rich receptor-like protein kinase 10 132 238 - -
Pral4884g00012 646 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 21 127 - -
Pral4884g00012 646 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Pral4884g00012 646 Pfam Salt stress response/antifungal 146 235 IPR002902 -
Pral4884g00012 646 Pfam Salt stress response/antifungal 28 124 IPR002902 -
Pral4884g00012 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Pral4884g00012 646 Gene3D Transferase(Phosphotransferase) domain 1 398 602 - -
Pral4884g00012 646 Gene3D Phosphorylase Kinase; domain 1 284 397 - -
Pral4884g00012 646 Pfam Protein tyrosine and serine/threonine kinase 325 592 IPR001245 GO:0004672|GO:0006468
Pral4884g00012 646 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 16 626 - -
Pral4884g00012 646 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 284 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4884g00012 Pral-Chr4884 81851 85048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4884g00012 1 646 Receptor kinase-like Gene Family AT4G05200 49.776 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4884g00012 PK_Tyr_Ser-Thr 8.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4884g00012 - - gmx:547727 832.017