Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4884g00011 ATGTCTACTTCCAAAATCTACGCACTTACTTCTTCCCTCTTCGTCTTCCTAACAATCTTCACAAGCGAAGCTTCTTTTAATTACACTGCTCATCACTGCTCAAACGCCACCATCCGCAACGCCACATTCCGACGAAACCTCAACGTCCTCCTCTACTCCCTCACCTCCAACGCCTCCCAGTTCGGCGGCTACTACATGACCATCATGGGCTTTGGAACCATCGACGCCGTCAACGGCCTCTTTCTCTGCCGTGGCGACATCGTCTCCCACACAATCTGCCAAGAGTGCGTCACCGCCGCTGCCAATTACATAACTTCCCGTTGCCCTAATCGAACCGAGGCCATAATCTGGTATGACCAGTGCATGCTGCGTTACACCGACAAGTTTTTCTGGTTCAACAGTGCCGTTCCTAGGGTAACCCTCGATGACGGTAAGATCTTCTCCGGCAGGGACCTGGAACAGTTCAACTTCTCTTTATTCAGCTTACTCAATGACTTGAGTACGAAGGCTGCGAAATCACCGACGGTGAAGAAGTTTGCTGTGGGCGAAGCGATATTATCGAGCTCGCCGTTGACGACGCTGTATGCTTTAGAACAGTGCACGCATGATTTAACCAGTGATCAGTGTGAGACATGTTTGCGAAAGGCCATCGAAACTTTTGTTGGTAATTGTTGTGTGGGAAAACAAGGGGCGAGGGTTCTTCTTGCTTCGTGCAACATCAGATATGAACTGTACCCCTTTTACAATGTAACGGCTGTATCACCTGGACCTGTTGTAAGATTTCCTCCTCCGTCAGATGGAGAAGAACTTACTCCTCTAGAGTCGTTGCAATTCTCTTTTGCCACAATTGAAGCTGCGACAAACAATTTTTCACAGCTTAACAAAATAGGCAAAGGTGGATTTGGGGAAGTCTACAAGGGTGTGCTTCCAGATAAACGCGAAATAGCAGTTAAGAAACTTTCAAGTAAATCTAAGCAGGGTGTGGTGGAATTTAAGAATGAGATTTCACTTATTGCCAATCTTCAACATAGAAATCTGGTTGCCTTGATTGGGTTTTGCTTGGAAGAAGACGAGAAAATGCTTATCTATGAATATGTGCCTAACAAGAGTCTTGATTACTTTTTATTTGATACTAATCCAAAGCGAAGGATATTAAATTGGTCAGAACGTTATAAGATCATAGGAGATATTGCAAGAGGAGTTCTATATCTACATGAGTATTCACGGCTCAAAGTTATACATCGTGATCTCAAGCCCAGCAATGTGTTGTTAGATGATAACATGAATCCAAAAATATCTGACTTTGGCTTAGCAAGAATAGTTGCTACAAATCAAAATCAGGAAATTACTAATAGAATAGTTGGAACATATGGTTATATGTCTCCTGAATATGCAATGTATGGGCGGTTTTCAGAAAAATTAGATATATATAGTTTTGGAGTTATAATCCTACAAATAATTAGTGCAAAAAGAATTGCTCGATCCCCGATTTCAAAGATTTTTGAAGATCTTTTAAGCCAGGTTCGTTGGAGGAATCATACCCCACTGGAAATTATGGAGTCAACCCTAAAAGAAACATACTCTCACACTGAAGTCATAAAGTGCATTCAAATTGGGTTATTGTGTGTACAAGAAGACCCAGATGATAGACCCACAATGGCCACAGTTATTTCATACCTCAATACCCAATTGATTGATTTGCCATTTCCAAGAGAACCTGCACTCTTCAGGTACAGTGCTGGGAAATCAACCAACATGGAAGATGGAGATCGCAGCTCAGGACAACCGTCCATTGATTGCAGCTCAGGACCTTCTTCCATCAACGACATGTCCAAGAGCACTTTTTTCCCTCGATAG 1857 0.4286 MSTSKIYALTSSLFVFLTIFTSEASFNYTAHHCSNATIRNATFRRNLNVLLYSLTSNASQFGGYYMTIMGFGTIDAVNGLFLCRGDIVSHTICQECVTAAANYITSRCPNRTEAIIWYDQCMLRYTDKFFWFNSAVPRVTLDDGKIFSGRDLEQFNFSLFSLLNDLSTKAAKSPTVKKFAVGEAILSSSPLTTLYALEQCTHDLTSDQCETCLRKAIETFVGNCCVGKQGARVLLASCNIRYELYPFYNVTAVSPGPVVRFPPPSDGEELTPLESLQFSFATIEAATNNFSQLNKIGKGGFGEVYKGVLPDKREIAVKKLSSKSKQGVVEFKNEISLIANLQHRNLVALIGFCLEEDEKMLIYEYVPNKSLDYFLFDTNPKRRILNWSERYKIIGDIARGVLYLHEYSRLKVIHRDLKPSNVLLDDNMNPKISDFGLARIVATNQNQEITNRIVGTYGYMSPEYAMYGRFSEKLDIYSFGVIILQIISAKRIARSPISKIFEDLLSQVRWRNHTPLEIMESTLKETYSHTEVIKCIQIGLLCVQEDPDDRPTMATVISYLNTQLIDLPFPREPALFRYSAGKSTNMEDGDRSSGQPSIDCSSGPSSINDMSKSTFFPR 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4884g00011 618 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 606 - -
Pral4884g00011 618 MobiDBLite consensus disorder prediction 585 618 - -
Pral4884g00011 618 Gene3D - 25 130 IPR038408 -
Pral4884g00011 618 Gene3D - 147 247 IPR038408 -
Pral4884g00011 618 Pfam Salt stress response/antifungal 33 127 IPR002902 -
Pral4884g00011 618 Pfam Salt stress response/antifungal 153 245 IPR002902 -
Pral4884g00011 618 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 262 365 - -
Pral4884g00011 618 Pfam Protein kinase domain 291 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00011 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Pral4884g00011 618 MobiDBLite consensus disorder prediction 582 618 - -
Pral4884g00011 618 SMART serkin_6 290 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00011 618 CDD STKc_IRAK 296 561 - -
Pral4884g00011 618 Gene3D Phosphorylase Kinase; domain 1 266 365 - -
Pral4884g00011 618 SUPERFAMILY Protein kinase-like (PK-like) 278 584 IPR011009 -
Pral4884g00011 618 ProSitePatterns Protein kinases ATP-binding region signature. 296 319 IPR017441 GO:0005524
Pral4884g00011 618 FunFam cysteine-rich receptor-like protein kinase 10 366 567 - -
Pral4884g00011 618 FunFam Cysteine-rich receptor-like protein kinase 10 139 247 - -
Pral4884g00011 618 ProSiteProfiles Gnk2-homologous domain profile. 135 247 IPR002902 -
Pral4884g00011 618 ProSiteProfiles Gnk2-homologous domain profile. 24 130 IPR002902 -
Pral4884g00011 618 Gene3D Transferase(Phosphotransferase) domain 1 366 566 - -
Pral4884g00011 618 ProSiteProfiles Protein kinase domain profile. 290 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4884g00011 Pral-Chr4884 74768 77603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4884g00011 12 618 Receptor kinase-like Gene Family AT4G05200 42.325 2.88e-171 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4884g00011 Pkinase 8.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4884g00011 - - cam:101500396 679.863