Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4884g00010 ATGGCGACTTCCAAATTCTGTGCATTCACTTCCTTCTTGGTGTTCCTAACCATCTTCTTCATCACAAGCAAAGCTTCTTCTAATTACACAGCTCATTACTGCTCAAACGCCATCATCTTCCCCACCAACACTACATTCAAACGAAACCTCAACGTCCTCCTCTATTCCCTAACCTCCAACGCCTCCCAGTTCGGCGGCTATTACATGACCATCATGGGCTTCGGAACCACCGACGCCGTCAACGGCCTCTTCCTCTGTCGCGGGGACGTGATCTCCCCTACCGCCTGCGAAGACTGCGTCACCGCCGCTGCTAAGGACTTAACTACCCGTTGCCCTAACCGAACCGAGGCCATAATCTGGTACGACCAGTGCATGCTGCGTTACACCGGCAAGTATTTCCGGTACGACAGCGTCACACCCGGAGTAAACCTCGACGACGGCAAGATATTCTCCGGCAGGGACTTGGAACAGTTCAATGTCTCGTTATTCAACTTATTGACTGAATTGACAACGAAGGCTGCGAGACCACCGACAGTGAAGAAGTTTGCCGTCGGCCAAGCGATATTATCGAGCTCGCCGGTGACGACGCTGTATGCTTTAGAGCAGTGCACGGACGACTTGACCAGTGATCAGTGTGAAACATGTCTGCGAAATGCCATTGGAATTTTCGGTAATTGCTGTGAGGGAAAACAAGGGGCGAGGGTTCTTCTTGCTTCGTGCTACATCAGATATGAACTATATCCGTTTTACAATGTAACGGCTGTATCACCTGGACCTGCAGTAACATTGTCTCCTGCTCCAGGGGAGGACAAAAATGAAACGCGAAGAATTCTTCTAATTGTCGTTCCAGTTTCAGTTGCTGTTATGATGTTGTGTTTGGGAGGGGCTTTCCTTCTGAAAATACGGAAGAAGCATAAGACTGCAGTACTTAATGAAAATCATGGAGAAGAAATTACCGCTCCAGAGTCGTTGCAATTCTCTTTTGCTACAATTGAAGCTGCGACAAGCAATTTTTCACAGCTTAACAAAATAGGCAAAGGTGGATTTGGGGAAGTCTACAAGGGTGCGCTTCCAGATAAACGAGAAATAGCAGTTAAGAAACTTTCAAGTAAATCTAAGCAGGGTGTGGTGGAATTTAAAAATGAGATTTCACTTATTGCCAAGCTTCAACATAGAAATCTGGTTGCCTTATTTGGATTTTGCTTGCAAGAAGAGGAGAAAATGCTGATCTATGAATATGTGCCTAACAAAAGTCTTGATTTCTTTTTATTTGATTCTAATCCAAAGAGAAGGATATTGAATTGGTCTGAGCGATACAACATCATCGGAGGCATTGCAAGAGGAATTCTATATCTACATGAGCATTCACGACTCAAAGTTATACACCGTGATCTCAAGCCTAGTAATGTGTTATTAGATGATAACATGAATCCAAAAATATCAGATTTTGGCTTAGCAAGAATAGTTGCTATAGATCAAAATCAAGGAAGTACTAGTAGAATTGTTGGAACATATGGTTACATGTCTCCTGAATATGCAATGCATGGACAATTTTCAGAAAAATCAGATGTATATAGTTTTGGAGTTATAATTCTAGAAATAATTAGTGCAAAAAGAAATGCTCGATCCCCCAAGTCAAAGATTCTTGAAGATCTTTTAAGTCAGGCATGGAGACAATGGAGGAATCACACCCCACTGGAAGTTCTGGACGCAAACCTTAAAGAATCATACTCTCACACTGAGGTCATAAAGTGCATTCAAATTGGGTTATTGTGTGTACAAGAAGACCCAGATGATAGACCCACAATGGCCACAGTTGTTTCATTCCTCAATACCCAATTAATTGATCTGCCATTTCCAAGAGAACCTGCGCTCTTCAGGTACAGTGCTGGGAAATCAACCAACATGGTAGATGGAGATTGCAGTTCAGGACAATCCTCCATTGATTCCACACCTTCTTCCATCAATGACATGTCCAAGACTACTTTCTTCCCTCGATATTACCATTTTCGTTCTCAGACTATGTTTCTCTTCAAAATTTATCCTCTTCTTCTTTTCACGTCCTTCTTGGCAACGCGAGCTCTCGCAGCTCCCGTTTACAATGGCCATTACTGCAACGACACGACCACGTACCCACGCAACTCCACATTTCAGCGTAATATTAATGTACTACTCTCTTCTCTCACCTCCAACGCCTCCCTAGATTCCTCTGGTTCCTACAATACCGTCATGGGCTTCGGCACGCCCTACGCCGTCAACGGCTTCTTCCTTTGCCGCGGCGATATCACCATGCCCACCTGTCACGATTGCGTCAACGCCGCCGCCAAAGATGTTATTTCCCGATGCCCTAACCAAACCGAGGCCGTTATCTGGTACGACGTCTGCACGCTGCGTTTCACCAACATGTTCTTCCGGTTTGAGAGCGTCTTTCCCGGAATGAATTTGACGGATGAGGAGAGCGTATCTAGCACCGATATTAACCTATTCAACCAGTCGTTGTTCAGATTGTTGGATGATTTGGACACGCGAGCTGCGAATTCGGAGACGGATAAGAAGTTCGCAACAGGGGAAGTGAGAGTTACGAGCGCGATGACTGTGTATGGGCTTGCGCAATGCTCGAAGGAAATGACATCCGAACAATGTGAAACCTGTTTGCAGAACGCCATCGGAGTTCTTCCGGCATGCTGTGAGGGAAAGCAAGGCGCGAGAGTTCTGCTTTCGCCCTGTAATGTCAGATACGAGTTGTTCCGGTTTTACAATTCAACCACTTCGTCACCTGGAAAGAAGAAATATGGATCAGGAACAATTGCAATGATTGTTATCCTTGTTGTTGTTTTTGTAATCCTCTTATGTTTAGGCTGCTATTTCCTGCTGAGAAGATCAAGGAAGAGTCATAGGACTATTCTCAGAGAACACTTTGGAAATGAAAGCGAGTCTTTGGAGTCATTGCAATTTAGTTTGGCTACAGTTGAAGCAGCAACAAACAAGTTTTCACAGCAGAATAAGATAGGCAAGGGTGGATTTGGAGAAGTTTACAAGGGTCGTCTTCAAGACGGACGAGAAATAGCAGTTAAAAAACTTTCTACAAGCTCAGGACAAGGTTCGATAGAATTCACAAATGAGATTTTACTCATAGCCAAGCTTCAACACAGGAATCTAGTGGCTTTGTTAGGATTTTGCTGGGAAGCAGAAGAGAAGATGCTTATCTATGAATATGTGCCCAACAGAAGCCTTGATTACTTTTTATTTGATTCTCAAAGGAGAAAACTACTGAACTGGGTTCAGCGTTATAGAATCCTGGAAGGAATTGCGCGAGGAATTCTTTATTTACATGAGTACTCAAGACTTAAAGTTATACACCGTGACCTTAAACCTAGTAATGTGTTATTGGATGATAATATGAATCCAAAGATTTCAGACTTTGGTTTGGCAAGAATAATTGCTATAGATGATGATCAAGGGAAAACAAGAAGAATAGTTGGAACATATGGTTACATGTCTCCAGAATATGCAATGTATGGACAATTTTCTGAAAAGTCTGATGTATTCGGTTATGGGGTCATAACATTGGAGGTGATCAGTGCAAAAAGAAATGCCCGATCACTAGACTCACGTAGTGTTGATGACCTTATTAGTCATGCTTGGAGACAATGGAGGGATCAAACACCGTTAGAAATACTGGACCCAGATCTAAAAGAAGCTTGCCCGCAGAGCGAAGTCATGAAGTGCATTCAGATTGGTTTGTTATGCGTACAAGAAAAACCAAATGATCGACCCACAATGGCAAACGTTGTTTCATATTTTAATAGTCCTTCAGCCGAATTACCTCTACCTCGACAGCCAGCATTTTTGATGAACAATGTAATGGCAGGGGAATCCAGTTCAGGTTCTAGATCTTTATACTCGGTAAATGATTTGTCTATCAGTAATTCTTTCCCTCGGTGA 3945 0.433 MATSKFCAFTSFLVFLTIFFITSKASSNYTAHYCSNAIIFPTNTTFKRNLNVLLYSLTSNASQFGGYYMTIMGFGTTDAVNGLFLCRGDVISPTACEDCVTAAAKDLTTRCPNRTEAIIWYDQCMLRYTGKYFRYDSVTPGVNLDDGKIFSGRDLEQFNVSLFNLLTELTTKAARPPTVKKFAVGQAILSSSPVTTLYALEQCTDDLTSDQCETCLRNAIGIFGNCCEGKQGARVLLASCYIRYELYPFYNVTAVSPGPAVTLSPAPGEDKNETRRILLIVVPVSVAVMMLCLGGAFLLKIRKKHKTAVLNENHGEEITAPESLQFSFATIEAATSNFSQLNKIGKGGFGEVYKGALPDKREIAVKKLSSKSKQGVVEFKNEISLIAKLQHRNLVALFGFCLQEEEKMLIYEYVPNKSLDFFLFDSNPKRRILNWSERYNIIGGIARGILYLHEHSRLKVIHRDLKPSNVLLDDNMNPKISDFGLARIVAIDQNQGSTSRIVGTYGYMSPEYAMHGQFSEKSDVYSFGVIILEIISAKRNARSPKSKILEDLLSQAWRQWRNHTPLEVLDANLKESYSHTEVIKCIQIGLLCVQEDPDDRPTMATVVSFLNTQLIDLPFPREPALFRYSAGKSTNMVDGDCSSGQSSIDSTPSSINDMSKTTFFPRYYHFRSQTMFLFKIYPLLLFTSFLATRALAAPVYNGHYCNDTTTYPRNSTFQRNINVLLSSLTSNASLDSSGSYNTVMGFGTPYAVNGFFLCRGDITMPTCHDCVNAAAKDVISRCPNQTEAVIWYDVCTLRFTNMFFRFESVFPGMNLTDEESVSSTDINLFNQSLFRLLDDLDTRAANSETDKKFATGEVRVTSAMTVYGLAQCSKEMTSEQCETCLQNAIGVLPACCEGKQGARVLLSPCNVRYELFRFYNSTTSSPGKKKYGSGTIAMIVILVVVFVILLCLGCYFLLRRSRKSHRTILREHFGNESESLESLQFSLATVEAATNKFSQQNKIGKGGFGEVYKGRLQDGREIAVKKLSTSSGQGSIEFTNEILLIAKLQHRNLVALLGFCWEAEEKMLIYEYVPNRSLDYFLFDSQRRKLLNWVQRYRILEGIARGILYLHEYSRLKVIHRDLKPSNVLLDDNMNPKISDFGLARIIAIDDDQGKTRRIVGTYGYMSPEYAMYGQFSEKSDVFGYGVITLEVISAKRNARSLDSRSVDDLISHAWRQWRDQTPLEILDPDLKEACPQSEVMKCIQIGLLCVQEKPNDRPTMANVVSYFNSPSAELPLPRQPAFLMNNVMAGESSSGSRSLYSVNDLSISNSFPR 1314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4884g00010 1314 Gene3D - 26 133 IPR038408 -
Pral4884g00010 1314 Gene3D - 150 249 IPR038408 -
Pral4884g00010 1314 Gene3D - 699 804 IPR038408 -
Pral4884g00010 1314 Gene3D - 814 918 IPR038408 -
Pral4884g00010 1314 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 958 1072 - -
Pral4884g00010 1314 ProSitePatterns Protein kinases ATP-binding region signature. 1003 1026 IPR017441 GO:0005524
Pral4884g00010 1314 ProSiteProfiles Protein kinase domain profile. 338 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00010 1314 FunFam cysteine-rich receptor-like protein kinase 10 1073 1275 - -
Pral4884g00010 1314 Gene3D Transferase(Phosphotransferase) domain 1 1073 1275 - -
Pral4884g00010 1314 Gene3D Transferase(Phosphotransferase) domain 1 414 616 - -
Pral4884g00010 1314 FunFam Cysteine-rich receptor-like protein kinase 10 813 918 - -
Pral4884g00010 1314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Pral4884g00010 1314 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 35 662 - -
Pral4884g00010 1314 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 133 - -
Pral4884g00010 1314 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 300 413 - -
Pral4884g00010 1314 SMART serkin_6 997 1268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00010 1314 SMART serkin_6 338 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00010 1314 ProSiteProfiles Gnk2-homologous domain profile. 811 918 IPR002902 -
Pral4884g00010 1314 ProSitePatterns Protein kinases ATP-binding region signature. 344 367 IPR017441 GO:0005524
Pral4884g00010 1314 Gene3D Phosphorylase Kinase; domain 1 300 413 - -
Pral4884g00010 1314 Gene3D Phosphorylase Kinase; domain 1 959 1072 - -
Pral4884g00010 1314 FunFam cysteine-rich receptor-like protein kinase 10 414 617 - -
Pral4884g00010 1314 CDD STKc_IRAK 1003 1269 - -
Pral4884g00010 1314 SUPERFAMILY Protein kinase-like (PK-like) 319 611 IPR011009 -
Pral4884g00010 1314 ProSiteProfiles Gnk2-homologous domain profile. 138 249 IPR002902 -
Pral4884g00010 1314 SUPERFAMILY Protein kinase-like (PK-like) 980 1295 IPR011009 -
Pral4884g00010 1314 CDD STKc_IRAK 344 611 - -
Pral4884g00010 1314 ProSiteProfiles Gnk2-homologous domain profile. 28 133 IPR002902 -
Pral4884g00010 1314 ProSiteProfiles Protein kinase domain profile. 997 1283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00010 1314 Pfam Protein tyrosine and serine/threonine kinase 341 610 IPR001245 GO:0004672|GO:0006468
Pral4884g00010 1314 Pfam Protein tyrosine and serine/threonine kinase 999 1266 IPR001245 GO:0004672|GO:0006468
Pral4884g00010 1314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1118 1130 IPR008271 GO:0004672|GO:0006468
Pral4884g00010 1314 ProSiteProfiles Gnk2-homologous domain profile. 699 804 IPR002902 -
Pral4884g00010 1314 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 698 804 - -
Pral4884g00010 1314 Pfam Salt stress response/antifungal 156 247 IPR002902 -
Pral4884g00010 1314 Pfam Salt stress response/antifungal 40 129 IPR002902 -
Pral4884g00010 1314 Pfam Salt stress response/antifungal 824 914 IPR002902 -
Pral4884g00010 1314 Pfam Salt stress response/antifungal 705 801 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4884g00010 Pral-Chr4884 62278 71265 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4884g00010 12 666 Receptor kinase-like Gene Family AT4G05200 45.171 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4884g00010 PK_Tyr_Ser-Thr 8.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4884g00010 - - ccaj:109813299 1464.13