Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4884g00009 ATGGCCTGGCCACTTTCCTTCTTCCCTTCAATCTTCATTTTTCAACAAACATTAAGAAAAACAGAGACTCCATTATTATATTCCCACCATGCTTCTGTTCACAAAATCACAAACTCTCTTCTTTCCCTTACGACGTTTCTTTTCGCAACATTCTTGGCAACCCCAGCTCGCGCAACTCCCGTTTACAATGGCCATTACTGCAACAACACGGTCACGTATCAACCCAACTCCACATTTCAACGTAATATTAATGTACTCCTCTCTTCTCTCTCCTCCAACGCCTCCCAAGACTCCTCTGGCTCCTACGACACTGCCATGGGCGCCGGCACCCCCTTCGCCGTCAACGGTTACTACCTCTGCCGCGGAGATATCGCCATCGCCACTTGTCAGGACTGCGTTGCCGCCGCCGCCAATGACATCATTTCCCGATGCCCTAACCAAACAGAGGCTGTCCTCTGGTACGACATCTGCACGCTGCGTTTCACCCGCTCGTACTTCAAGTCTGGAAGCGTTGTTCCTGGAACGAATTTGACGGACGGTAAAACCGTATCTAACACTGACATTAGCCAATTCAAGTCGTTGTTCAGATTGTTGAATGATTTGGGGACACAAGCTGCTAATTCGGAGACGGCGAAGAAATTCGGGACTGGGGAAGTGAGGGTTACGAGGTCGATGACGGTGTATGGGCTTGCGCAATGCTCGGGGGAACTGAGCTCCCCACAATGTGAGACGTGTTTGCAGAATGCTGTCGGCGTTCTTCCGTCGTGCTGTGGGGGAAGACAAGGCGCGAGAGTTCTGCTTGCAACCTGTAATGTGAGATACGAGCTGTCCCAATTTTACAATTCAACCACTTCGTCACCGGGAAAGAAGAAATATGGATCAGGAACTATCGCCATGATTGTTATCCTTCCTCTTGTTTTTATAATTCTCTCGTGTTTAGGCTGCTATTTCCTGCTGGGCAGATCAAGGAAGAGTTACAAAACGACTCTAAGCGAACATTTTGGGAAAGAAACCGGCGCTTTGGAGTCATTGCAATTTAGTTTGGCTACGCTTGAAGTAGCGACAGACAAGTTTTCACACCAGAACAGGATTGGCCAAGGAGGATTTGGAGAAGTTTAGAAGGGTGTTCTTCGAGACGGACAAGAAATAGCTGTTAAAAAGCTCTCTAAAAGTTCAGGACAAGGTTCAATAGAATTCAAGAATGAGATTTTGCTCATAGCCAAGCTTCAGCACAGGAATCTAGTGGTTTTATTAGGATTTTGCTTGGAAGCAGAAGAAAAAATGCTTGTTTATGAATATGTGCCCAACAAAAGCCTTGATTATTTTTTATTCGATTCTCAAAGACAACCACTGAGTTGGGTTCAGCGTTACAGAATCATGGAAGGAATTGCTCGAGGAATTCTTTACTTACATGAGCACTCAAGACTCAAAGTTATACACACCGATCTCAAAACTAGTAATGTGTTGTTGGATGATAACATGGATCCAAAAATCTCAGATTTTGGTATGGCAAGGATAGTTGCTATAGATCATGGTCAAGTGAAAACAAGAAGAATAGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGCATGGACAATTTTCTGAAAAGTCTGACGTTTTTAGTTTTGGGGTCATAAGTTTGGAGGTAATTAGTGCAAAAAGAAATGCACGATCGCTTGACTCACATAATGTTGATGACCTTATCAGTCATGCTTGGAGACAGTGGAGGGATCAAACACCATTAGAAATCCTGGACCCAATTCTAAAAGAAGCTTGCCCACATAACGAAGTCATGAAGTGCATTCAGATTGGTTTGTTATGCGTCCAAGAAAATCCAAATGATAGACCCACAATGGCAAACGTTGTTTCATATTTTAGTAGTCCTTCAGCCGATCTGCCTCTCCCTCGACAACCAGCATTTTTTATGAACAATGGAATGGCAGGGGAATCCAGTTCAGGCTCTGCATGTTTATACTCCGTAAATGATTTGTCCATCACTAATTCTTTCCCTCGGTGA 2025 0.442 MAWPLSFFPSIFIFQQTLRKTETPLLYSHHASVHKITNSLLSLTTFLFATFLATPARATPVYNGHYCNNTVTYQPNSTFQRNINVLLSSLSSNASQDSSGSYDTAMGAGTPFAVNGYYLCRGDIAIATCQDCVAAAANDIISRCPNQTEAVLWYDICTLRFTRSYFKSGSVVPGTNLTDGKTVSNTDISQFNXSLFRLLNDLGTQAANSETAKKFGTGEVRVTRSMTVYGLAQCSGELSSPQCETCLQNAVGVLPSCCGGRQGARVLLATCNVRYELSQFYNSTTSSPGKKKYGSGTIAMIVILPLVFIILSCLGCYFLLGRSRKSYKTTLSEHFGKETGALESLQFSLATLEVATDKFSHQNRIGQGGFGEVXKGVLRDGQEIAVKKLSKSSGQGSIEFKNEILLIAKLQHRNLVVLLGFCLEAEEKMLVYEYVPNKSLDYFLFDSQRQPLSWVQRYRIMEGIARGILYLHEHSRLKVIHTDLKTSNVLLDDNMDPKISDFGMARIVAIDHGQVKTRRIVGTYGYMSPEYAMHGQFSEKSDVFSFGVISLEVISAKRNARSLDSHNVDDLISHAWRQWRDQTPLEILDPILKEACPHNEVMKCIQIGLLCVQENPNDRPTMANVVSYFSSPSADLPLPRQPAFFMNNGMAGESSSGSACLYSVNDLSITNSFPR 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4884g00009 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Pral4884g00009 675 ProSitePatterns Protein kinases ATP-binding region signature. 365 388 IPR017441 GO:0005524
Pral4884g00009 675 FunFam Cysteine-rich receptor-like protein kinase 10 175 280 - -
Pral4884g00009 675 Gene3D - 176 280 IPR038408 -
Pral4884g00009 675 Gene3D - 61 166 IPR038408 -
Pral4884g00009 675 ProSiteProfiles Gnk2-homologous domain profile. 171 280 IPR002902 -
Pral4884g00009 675 CDD STKc_IRAK 365 629 - -
Pral4884g00009 675 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 60 166 - -
Pral4884g00009 675 ProSiteProfiles Protein kinase domain profile. 359 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00009 675 Gene3D Transferase(Phosphotransferase) domain 1 435 635 - -
Pral4884g00009 675 Pfam Salt stress response/antifungal 67 162 IPR002902 -
Pral4884g00009 675 Pfam Salt stress response/antifungal 184 276 IPR002902 -
Pral4884g00009 675 FunFam Cysteine-rich receptor-like protein kinase 10 322 434 - -
Pral4884g00009 675 Pfam Protein tyrosine and serine/threonine kinase 362 627 IPR001245 GO:0004672|GO:0006468
Pral4884g00009 675 SMART serkin_6 359 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4884g00009 675 Gene3D Phosphorylase Kinase; domain 1 322 434 - -
Pral4884g00009 675 SUPERFAMILY Protein kinase-like (PK-like) 344 649 IPR011009 -
Pral4884g00009 675 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 65 670 - -
Pral4884g00009 675 ProSiteProfiles Gnk2-homologous domain profile. 61 166 IPR002902 -
Pral4884g00009 675 FunFam cysteine-rich receptor-like protein kinase 10 435 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4884g00009 Pral-Chr4884 57113 60273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4884g00009 31 675 Receptor kinase-like Gene Family AT4G05200 43.088 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4884g00009 PK_Tyr_Ser-Thr 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4884g00009 - - ccaj:109813299 761.525