LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4884g00008	ATGGCTTTGGTTTCTCTTAGAATGCTTTCCTTTCTCTGTATCCTTCCCATACTCATATCTCAAGTCACTGCCCAGCCTGAGTTCCTGTATCATTACTGTAACGAGGGTAATGGCAACTACACTGCTAATAGTGCCTACCAGACCAACCTCAATACTCTTTTGTCCAATATTGCTTCCAACACAGAAATTGACTATGGCTTCTACAACTTCTCTTATGGCCAAAACTCCGACAAGGTTAATGCAATAGGGTTGTGCAGAGGAGATGTTGCCTTAGATATATGCCGCAGTTGCCTCAATGATTCTAGAACCCTCCTCACCCGGCTCTGTCCAAATCAGATGGAGGCGATTGGTTTCTATGACAATTGCATGTTACGCTATTCAAACCGTTCAATTTTTAACACCGTGGAAAATTTGCCTTCCTTTTGCATGTGGAACATTAAGAATGCAACAGGTGTGGATCAGTTCAACAAAGCGCTAAGGAATTTGCTGGATGGTTTAAGTAGGACGGCTTCATCAGGGAGCTCTCTTCGTAAGTTTGCTGCAGCAAACGCTGAAGGCCCAGACTTTCAGACTCTGTATGGTCTCGTGCAGTGTACACCTGATCTATCTTCAGATCAGTGCAGTGACTGCTTGGTCGAGGCAATCTCAGGACTCCCACAATGTTCTGGTGGCAAGATTGGAGGTAGAATTTTAAGACCAAGCTGTAATTTTAGATATGAAGACTACCGCTTCTTCAACGCTACCAGTGATTCAACACCACCATCAGAAGGAAAGAGCAACACATCACGAACTATAATTGCCATAGTTGTGCCAATTGCTTCCGTTATTGTCTTGCTCGTCCTTGTCTGCATCTGTTTACGAATGAGGAAACCGCGGAAACATATCAAAAATGATGAATTTGAAGCTGACGGTGAAATGAGGTCATCTGAGACATTGCACTTGAACTATGATGCCATCATAGCTGCCACAAATAACTTTTCTGAAGAAAATAAGCTAGGACAAGGCGGATTTGGACCTGTTTACAAGGGTAAGCTTATTGGTGGACAAGAAATTGCCGTGAAAAGGTTGTCTGGGAATTCTTCCCAGGGGGATAAAGAATTTAAGAATGAAGTGCTGTTAGTAGCCAAGCTTCAGCATCGAAATCTAGTTAGACTACTTGGTTTTTGTTTAGAAAGGCAAGAAAGACTACTAGTCTATGAGTTTATTCCCCATAAAAGTCTTGATTGCTTCATATTTGATCCAATCAAGCGTGCACAGTTATCTTGGGAAACAAGATACAAAATTGTAGGAGGCATTGCTAGAGGACTTCTTTACCTTCATGAAGATTCTCGCTTGCGAGTTATTCATCGTGATCTCAAAGCAAGTAACGTTCTTTTAGATGCAGAGATGAATGCAAAAATATCAGATTTTGGTATGGCAAGATTAGTTGGAAGGGACCAAACTCAAGACAATACAAGTAAAGTTGTAGGAACATTTGGATATATGGCCCCTGAATATGTACTGCATGGACAATTCTCAGTAAAAACGGATGTTTTTAGCTTTGGTGTTCTAGTTCTAGAGATTGTAACTGGCCGTAAAAATAGTGAGGTTTTTGAAGGCGAGAATGCAGAGAATCTAGTCAGCTTTGCATGGAGAAAGTGGAGGGAAGGAACAGCCACAAGTATTGTGGACCCCGCAATTATGGGAGGTTCAAGAGATGAAATAATGAGATGCATCCACATAGGATTGCTCTGTGTTCAAGATGATGTAGCTGACAGACCAACCATGGCTTCAGTTGAAGTCATGCTTAACAGCTACTCTGCTACCTTTCCTTTGCCTTCTCAACCTGCTTCCTACATGAATAGTAGAAATTTTTCCTACAGCAGGTCCAGAGAGTATAATTCAGGGGCAATAACATCAAATGAACTCAAAAACCAATCTGTTCAAGCATCATTGAATGAAGCATCGATCTCTCAGCCATTTCCTCGTTAG	1971	0.417	MALVSLRMLSFLCILPILISQVTAQPEFLYHYCNEGNGNYTANSAYQTNLNTLLSNIASNTEIDYGFYNFSYGQNSDKVNAIGLCRGDVALDICRSCLNDSRTLLTRLCPNQMEAIGFYDNCMLRYSNRSIFNTVENLPSFCMWNIKNATGVDQFNKALRNLLDGLSRTASSGSSLRKFAAANAEGPDFQTLYGLVQCTPDLSSDQCSDCLVEAISGLPQCSGGKIGGRILRPSCNFRYEDYRFFNATSDSTPPSEGKSNTSRTIIAIVVPIASVIVLLVLVCICLRMRKPRKHIKNDEFEADGEMRSSETLHLNYDAIIAATNNFSEENKLGQGGFGPVYKGKLIGGQEIAVKRLSGNSSQGDKEFKNEVLLVAKLQHRNLVRLLGFCLERQERLLVYEFIPHKSLDCFIFDPIKRAQLSWETRYKIVGGIARGLLYLHEDSRLRVIHRDLKASNVLLDAEMNAKISDFGMARLVGRDQTQDNTSKVVGTFGYMAPEYVLHGQFSVKTDVFSFGVLVLEIVTGRKNSEVFEGENAENLVSFAWRKWREGTATSIVDPAIMGGSRDEIMRCIHIGLLCVQDDVADRPTMASVEVMLNSYSATFPLPSQPASYMNSRNFSYSRSREYNSGAITSNELKNQSVQASLNEASISQPFPR	656

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4884g00008	656	Gene3D	Phosphorylase Kinase; domain 1	288	401	-	-
	Pral4884g00008	656	ProSiteProfiles	Gnk2-homologous domain profile.	28	131	IPR002902	-
	Pral4884g00008	656	FunFam	Cysteine-rich receptor-like protein kinase 10	139	244	-	-
	Pral4884g00008	656	SUPERFAMILY	Protein kinase-like (PK-like)	315	627	IPR011009	-
	Pral4884g00008	656	CDD	STKc_IRAK	332	597	-	-
	Pral4884g00008	656	Pfam	Salt stress response/antifungal	147	242	IPR002902	-
	Pral4884g00008	656	Pfam	Salt stress response/antifungal	33	128	IPR002902	-
	Pral4884g00008	656	ProSiteProfiles	Protein kinase domain profile.	326	603	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4884g00008	656	Pfam	Protein tyrosine and serine/threonine kinase	329	539	IPR001245	GO:0004672\|GO:0006468
	Pral4884g00008	656	SMART	serkin_6	326	600	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4884g00008	656	Gene3D	-	139	244	IPR038408	-
	Pral4884g00008	656	Gene3D	-	25	130	IPR038408	-
	Pral4884g00008	656	FunFam	Cysteine-rich receptor-like protein kinase 28	402	604	-	-
	Pral4884g00008	656	FunFam	Cysteine-rich receptor-like protein kinase 10	288	401	-	-
	Pral4884g00008	656	FunFam	Cysteine-rich RLK (RECEPTOR-like protein kinase) 10	26	131	-	-
	Pral4884g00008	656	Gene3D	Transferase(Phosphotransferase) domain 1	402	604	-	-
	Pral4884g00008	656	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	29	651	-	-
	Pral4884g00008	656	ProSiteProfiles	Gnk2-homologous domain profile.	137	244	IPR002902	-
	Pral4884g00008	656	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	447	459	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4884g00008	Pral-Chr4884	52567	55960	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4884g00008	11	656	Receptor kinase-like Gene Family	AT4G21410	48.023	0.0	604

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Pral4884g00008		PK_Tyr_Ser-Thr	1.2e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4884g00008	-		-	lang:109353867	893.264