Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4883g00006 ATGAGGTTCTTCATCTTCATCACCTTTCTCCTTCTGGCCGTCCCTTCCAACGCTGCAACATCTTCTTCTCAACTGGTTGAGACCCTTCCTGGCTTTCCTGGAAAACTTCCTTTCACTCTTGAAACTGGGTATGTGGGAGTTGGCGACTCGGAAAGCGTTCAGCTCTTTTACTACTTCATTGAATCTGAGAGAGATCCTGATGAAGATCCTCTCTTGCTCTGGCTCACAGGTGGTCCTGGTTGTTCTGGTTTCTCTGGCCTCGTCTATGAAGTTGGTCCCCTGTCATTTGATTATGCCAAGTCTAGTAGCGGGGAAGTGAAAGTTCCAGTACTGAAGTTGAATCCATACTCGTGGACTACGGTATCTAACATGATTTTTATTGACGCCCCCGTGGGCACTGGGTTCTCGTATGCAACAAACCCAGAGGCATATCTGGTCGATGATTGGTTATCCGTTACACAAACCCATGAGTTTCTCAGGAAGTGGCTGTTGTCTCATCCCCGGTTCCTAAAACATCCGCTGTACATTTCTGGTGATTCGTATTCAGGCATCATTATCCCTATCCTTGTCAGCAAGATCTCTGACGATAATGACGCAGGTATTAAGCCACAACTGAATCTAAAGGGTTATTCCATTGGAAATCCAGTTACAGATGTAACTATTGATGAGAACTGGAGAGTTCCCTTTGCACACAGAATGGCACTCATACCAGATAAGCTTTATGAGTCAACCAAAAGGAATTGCCATGGTCAATATATGGATGTAGATCCAAACAACGCTGCATGCTCAGGGGATCTTCAAGTTTTTACAGAGTGCACCAAGATGCTAATGATCGGAAACATACTAGAGCCTGATTGCGTTACAGACACGCCAAAACCAGAATCACTCAAATGGGATCCTAATATTGTCAAAGAAGATTCCTTGGATCTTCTTTCAACCGGGGAGCATTCTGAACCTTGGTGTCGGAATTACAACTATGTCTTCTCTTACATCTGGGCTAATGACGAAGAAGTTCAGGCTGCCCTCCACATTCGGAAGGGGACGAAGAAGGACTGGCAGAGATGCAATACGAGTTTGGCTTACACAGAGGATGTCACAAGTAGTTTCCCATTCCACAAAAACCTCACAAACAAACCCTACGAAGTTCTGATTTACAGTGGAGACCATGACATGGTTGTTCCATACGTGGGTACCATGGCATGGGTAAAGTCTCTGAACTTGACAGAAAGTAGCAAGTGGAGACCATGGTTTGTCCAGGGGCAAGTTGGAGGATATACAATCGAGTATAAACGCAGCAACTACAGCTTAACATATGCCACAGTGAAGGGAGCAGGACACACGGCGCCAGAGTACAATCCTCCACAATGCTTGGCTATGTTTTCTAGGTGGCTTGCTCGTTACCCTCTATAA 1410 0.4553 MRFFIFITFLLLAVPSNAATSSSQLVETLPGFPGKLPFTLETGYVGVGDSESVQLFYYFIESERDPDEDPLLLWLTGGPGCSGFSGLVYEVGPLSFDYAKSSSGEVKVPVLKLNPYSWTTVSNMIFIDAPVGTGFSYATNPEAYLVDDWLSVTQTHEFLRKWLLSHPRFLKHPLYISGDSYSGIIIPILVSKISDDNDAGIKPQLNLKGYSIGNPVTDVTIDENWRVPFAHRMALIPDKLYESTKRNCHGQYMDVDPNNAACSGDLQVFTECTKMLMIGNILEPDCVTDTPKPESLKWDPNIVKEDSLDLLSTGEHSEPWCRNYNYVFSYIWANDEEVQAALHIRKGTKKDWQRCNTSLAYTEDVTSSFPFHKNLTNKPYEVLIYSGDHDMVVPYVGTMAWVKSLNLTESSKWRPWFVQGQVGGYTIEYKRSNYSLTYATVKGAGHTAPEYNPPQCLAMFSRWLARYPL 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4883g00006 469 SUPERFAMILY alpha/beta-Hydrolases 26 468 IPR029058 -
Pral4883g00006 469 Gene3D alpha/beta hydrolase 23 468 IPR029058 -
Pral4883g00006 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 453 IPR001563 GO:0004185|GO:0006508
Pral4883g00006 469 FunFam Serine carboxypeptidase-like 19 19 292 - -
Pral4883g00006 469 ProSitePatterns Serine carboxypeptidases, histidine active site. 436 453 IPR033124 GO:0004185
Pral4883g00006 469 FunFam Carboxypeptidase 368 466 - -
Pral4883g00006 469 FunFam Carboxypeptidase 320 468 - -
Pral4883g00006 469 Pfam Serine carboxypeptidase 30 465 IPR001563 GO:0004185|GO:0006508
Pral4883g00006 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Pral4883g00006 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Pral4883g00006 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Pral4883g00006 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4883g00006 Pral-Chr4883 15001 19307 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4883g00006 332 469 Calmodulin-binding Proteins AT2G22960 50.000 5.43e-44 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4883g00006 K16296 - qsu:112015027 600.512