Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4883g00005 ATGGCTACTCAATGCAGATTGTTTTGGTGTTTTCTCATTCTTTTGGTTCTCTCAAACTCTGTTTCTTCTCAAACCATCGTCAAGACCTTGCCTGGTTTTGAAGGGAACCTTCCTTTCTTTCTTGAAACTGGCTACATTGGGGTAGGAGAAATGGATGAGATTCAGCTGTTTTATTACTTCTTTAAATCAGAGAGGAAGCCAAATGAGGACCCTCTTGTGCTCTGGCTTCCCACTGGCCCTGGCTGCTCTGCTCTCTCTTCCATCTTGTACGAGAATGGTCCAATTCGTTTCAATTACAAGAATTCAAGCATCCAAGACAAACCGGTTTTAGAGTTGAATATTTACTCTTGGACTAAGGTTGCCAATGTAATTTTCCTGGATGCACCCGTTGGCTCTGGGTTTTCTTACTCAACAGTTTCCTCAGGATACAACACCAGTGACACAAAAACTGTCTCAAACATTCATGAGTTTATCAGAAAGTGGCTCTTAATGCATCCTGAGCACGTGGAAAATCAACTTGTAATTGGTGGAGAATCTTATTCTGGCATCATTGCTCCAGCTGTTGTCCAGAAAATTTTAGATGGCAATGCAGCTAAAGAGCATCCCTGGTTGAATATCCAAACTTTGGTTGTGGGAAACCCATTCACTGATGTATATTACGATATAAATTCAAGAGTTAAGTTTGCTGACAGAGTTGCACTTATATCTGATGATCTCTATGAGCAAGCTAAATTTCATTGCCATGGAGAATATGTTCACCCAAACAGAAGTAATACTGCCTGTGCTGCGGTTCTTGAAATGATCCATCGGTGTTTGGAAGACTTGAATGCTGCGATGATACTGGAAAACAAGTGTGCAGCTTTCTCTCCAAGACCAAAGAACATCCAGTGGGATTTAGGCTCTCTTGGTCTTAATCTCACTGATTCGCTCTTCTCGGAGGCCAATCCCATTACTTACACCGGATATTGCAGAAAATATAACTATCTGTTTGCCTCCCTGTGGGCAAATGATTTAGCTGTACAAGAAGCTCTGAACGTTAGAAATGGAACTATAGAACATTGGGAGAGATGCAACAACAGCATAGCTTACACTCATGACATAAAAAGTAGCCTTCATTATTACAAGAACTTCTTAAGTGCAAAGCCTCTCCGAGTTCTGGTTTACAGTGGAGATCATGATCTGATCATCCCATATGTGGGCACAGAGGAATGGATTGCAAGTTTGAACATGACCATATCTACTGGTAATCATGAGTGGAGACCTTGGTATGTTGATGGACAGGTTGCAGGATATACAGAGATATACACCAAAAAGGAGTTCCGTATAACATATGCAACAGTTAAGGGAGCAGGTCATACAGCTCCAGAGTACAAGCCAAAGCAGTGCTATAACATGATTGAGAGATATCTTGCTTACTTCTTCCTTTAA 1428 0.4125 MATQCRLFWCFLILLVLSNSVSSQTIVKTLPGFEGNLPFFLETGYIGVGEMDEIQLFYYFFKSERKPNEDPLVLWLPTGPGCSALSSILYENGPIRFNYKNSSIQDKPVLELNIYSWTKVANVIFLDAPVGSGFSYSTVSSGYNTSDTKTVSNIHEFIRKWLLMHPEHVENQLVIGGESYSGIIAPAVVQKILDGNAAKEHPWLNIQTLVVGNPFTDVYYDINSRVKFADRVALISDDLYEQAKFHCHGEYVHPNRSNTACAAVLEMIHRCLEDLNAAMILENKCAAFSPRPKNIQWDLGSLGLNLTDSLFSEANPITYTGYCRKYNYLFASLWANDLAVQEALNVRNGTIEHWERCNNSIAYTHDIKSSLHYYKNFLSAKPLRVLVYSGDHDLIIPYVGTEEWIASLNMTISTGNHEWRPWYVDGQVAGYTEIYTKKEFRITYATVKGAGHTAPEYKPKQCYNMIERYLAYFFL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4883g00005 475 SUPERFAMILY alpha/beta-Hydrolases 27 471 IPR029058 -
Pral4883g00005 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Pral4883g00005 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 442 455 IPR001563 GO:0004185|GO:0006508
Pral4883g00005 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Pral4883g00005 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Pral4883g00005 475 Gene3D alpha/beta hydrolase 20 292 IPR029058 -
Pral4883g00005 475 Gene3D - 323 473 - -
Pral4883g00005 475 FunFam Serine carboxypeptidase-like 19 20 291 - -
Pral4883g00005 475 FunFam Carboxypeptidase 322 473 - -
Pral4883g00005 475 Pfam Serine carboxypeptidase 31 470 IPR001563 GO:0004185|GO:0006508
Pral4883g00005 475 ProSitePatterns Serine carboxypeptidases, histidine active site. 442 459 IPR033124 GO:0004185
Pral4883g00005 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 459 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4883g00005 Pral-Chr4883 8790 13357 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4883g00005 331 471 Calmodulin-binding Proteins AT2G22960 48.936 2.15e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4883g00005 K16296 - cave:132177555 526.939