Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4883g00004 ATGGCTACTCAATGCAGATTGTTTTGGTGTTTTCTCATTCTTTTGGTTCTCTCAAACTCTGTTTCTTCTCAAACCATCGTCAAGACCTTGCCTGGTTTTGAAGGGAACCTTCCTTTCTTTCTTGAAACTGGCTACATTGGGGTAGGAGAAATGGATGAGATTCAGCTGTTTTATTACTTCTTTAAATCAGAGAGGAAGCCAAATGAGGACCCTCTTGTGCTCTGGCTTCCCACTGGCCCTGGCTGCTCTGCTCTCTCTTCCATCTTGTACGAGAATGGTCCAATTCGTTTCAATTACAAGAATTCAAGCATCCAAGACAAACCGGTTTTAGAGTTGAATATTTACTCTTGGACTAAGGTTGCCAATGTAATTTTCCTGGATGCACCCGTTGGCTCTGGGTTTTCTTACTCAACAGTTTCCTCAGGATACAACACCAGTGACACAAAAACTGTCTCAAACATTCATGAGTTTATCAGAAAGTGGCTCTTAATGCATCCTGAGCACGTGGAAAATCAACTTGTAATTGGTGGAGAATCTTATTCTGGCATCATTGCTCCAGCTGTTGTCCAGAAAATTTTAGATGGCAATGCAGCTAAAGAGCATCCCTGGTTGAATATCCAACAAGCTAAATTTCATTGCCATGGAGAATATGTTCACCCAAACAGAAGTAATACTGCCTGTGCTGCGGTTCTTGAAATGATCCATCGGTGTTTGGAAGACTTGAATGCTGCGATGATACTGGAAAACAAGTGTGCAGCTTTCTCTCCAAGACCAAAGAACATCCAGTGGGATTTAGGCTCTCTTGGTCTTAATCTCACTGATTCGCTCTTCTCGGAGGCCAATCCCATTACTTACACCGGATATTGCAGAAAATATAACTATCTGTTTGCCTCCCTGTGGGCAAATGATTTAGCTGTACAAGAAGCTCTGAACGTTAGAAATGGAACTATAGAACATTGGGAGAGATGCAACAACAGCATAGCTTACACTCATGACATAAAAAGTAGCCTTCATTATTACAAGAACTTCTTAAGTGCAAAGCCTCTCCGAGTTCTGGTTTACAGTGGAGATCATGATCTGATCATCCCATATGTGGGCACAGAGGAATGGATTGCAAGTTTGAACATGACCATATCTACTGGTAATCATGAGTGGAGACCTTGGTATGTTGATGGACAGGTTGCAGGATATACAGAGATATACACCAAAAAGGAGTTCCGTATAACATATGCAACAGTTAAGGGAGCAGGTCATACAGCTCCAGAGTACAAGCCAAAGCAGTGCTATAACATGATTGAGAGATATCTTGCTTACTTCTTCCTTTAA 1326 0.417 MATQCRLFWCFLILLVLSNSVSSQTIVKTLPGFEGNLPFFLETGYIGVGEMDEIQLFYYFFKSERKPNEDPLVLWLPTGPGCSALSSILYENGPIRFNYKNSSIQDKPVLELNIYSWTKVANVIFLDAPVGSGFSYSTVSSGYNTSDTKTVSNIHEFIRKWLLMHPEHVENQLVIGGESYSGIIAPAVVQKILDGNAAKEHPWLNIQQAKFHCHGEYVHPNRSNTACAAVLEMIHRCLEDLNAAMILENKCAAFSPRPKNIQWDLGSLGLNLTDSLFSEANPITYTGYCRKYNYLFASLWANDLAVQEALNVRNGTIEHWERCNNSIAYTHDIKSSLHYYKNFLSAKPLRVLVYSGDHDLIIPYVGTEEWIASLNMTISTGNHEWRPWYVDGQVAGYTEIYTKKEFRITYATVKGAGHTAPEYKPKQCYNMIERYLAYFFL 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4883g00004 441 ProSitePatterns Serine carboxypeptidases, histidine active site. 408 425 IPR033124 GO:0004185
Pral4883g00004 441 Gene3D alpha/beta hydrolase 20 439 IPR029058 -
Pral4883g00004 441 SUPERFAMILY alpha/beta-Hydrolases 27 437 IPR029058 -
Pral4883g00004 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Pral4883g00004 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Pral4883g00004 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 408 421 IPR001563 GO:0004185|GO:0006508
Pral4883g00004 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Pral4883g00004 441 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 425 IPR001563 GO:0004185|GO:0006508
Pral4883g00004 441 Pfam Serine carboxypeptidase 31 207 IPR001563 GO:0004185|GO:0006508
Pral4883g00004 441 Pfam Serine carboxypeptidase 213 436 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4883g00004 Pral-Chr4883 8790 13357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4883g00004 297 437 Calmodulin-binding Proteins AT2G22960 48.936 1.11e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4883g00004 K16296 - pop:112325867 459.529