Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4882g00046 ATGTCTTGCTCGCCGGCCGCCGGTGACTTGCTGTGCGGTGAGGTTGCCGATGAAGTTGTCTACGGTGAAAACCAAAGGACGTCGCCGCCGTACTTGCAGCCGTATTCACCTCCTTCAGACGACGCAACCATCGGCGGACTCATCGACGTCGAGGCACAGCACATGCCCGACCCAGATTACCTGCGGCGGTGCCGTTTTCGTTTAATCGACGTAACCGCTCGCCAAGACTCCATCAACTGGATCTTGAAGGTTCGCGCACACTACGAGTTTCGTCCGGTAACGGCGTTCCTCTCAGTCAACTACCTCGATCGTTTTCTGTCTTGCTCTCCACTTCCGCGACAAAGTCAGTGGGAGTATCATCTGCTATCAGTGGCATGCTTGTCTTTAGCGGCGAAAATGGAGGAACCTGAAGTGCCTCTGTTACTGGACCTTCAATTAGTGGATCCCAGATTTGTATTCGAACCCAAAACGATTCAAAGAATGGAGCTGTGTGTCATGACCAAGCTAAGCTGGAGATTACGCTCCATAACACCCTTCGATTATCTCCATTACTTCATCTCTAAGCTCTCTTGCGACCCGCAACCCGATTCCATAGCCCGGCTCTTCTCCGCTGCTTCCAATCTCATCCTCAGCACCGCCCTCGTTATTGATTTCTTGGGTTTTGCGCCGTCGGCCATAGCGGCCGCTGCGGTTCTCTGTTCAGCTGGCCAGGGCCAATCGCCGCCGTTCTTCCATGATGGAGTAAACAAAGTACCCGCATACTCCTTAGTCGTGAATATAAATTATTCATAA 792 0.524 MSCSPAAGDLLCGEVADEVVYGENQRTSPPYLQPYSPPSDDATIGGLIDVEAQHMPDPDYLRRCRFRLIDVTARQDSINWILKVRAHYEFRPVTAFLSVNYLDRFLSCSPLPRQSQWEYHLLSVACLSLAAKMEEPEVPLLLDLQLVDPRFVFEPKTIQRMELCVMTKLSWRLRSITPFDYLHYFISKLSCDPQPDSIARLFSAASNLILSTALVIDFLGFAPSAIAAAAVLCSAGQGQSPPFFHDGVNKVPAYSLVVNINYS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4882g00046 263 Pfam Cyclin, N-terminal domain 47 173 IPR006671 -
Pral4882g00046 263 Gene3D - 47 235 - -
Pral4882g00046 263 FunFam D2/4-type cyclin 57 174 - -
Pral4882g00046 263 CDD CYCLIN_AtCycD-like_rpt1 73 171 - -
Pral4882g00046 263 Gene3D - 57 174 - -
Pral4882g00046 263 PANTHER CYCLINS 49 235 IPR039361 -
Pral4882g00046 263 SMART cyclin_7 79 167 IPR013763 -
Pral4882g00046 263 Pfam Cyclin, C-terminal domain 176 237 IPR004367 -
Pral4882g00046 263 SUPERFAMILY Cyclin-like 45 173 IPR036915 -
Pral4882g00046 263 ProSitePatterns Cyclins signature. 74 105 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4882g00046 Pral-Chr4882 189944 191698 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4882g00046 9 250 Core Cell Cycle Gene Families AT1G70210 44.444 2.09e-63 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4882g00046 K18810 - qsa:O6P43_031142 278.485